RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SYCE1Q8N0S2 351 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
CECR3-201ENST00000428828 ZNF184Q99676 751 aaPredicted RBP11.85□□□□□ -0.51
CECR3-201ENST00000428828 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 GPR62Q9BZJ7 368 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 BRD8Q9H0E9 1235 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 DDX47Q9H0S4 455 aaKnown RBP11.85□□□□□ -0.51
CECR3-201ENST00000428828 CISHQ9NSE2 258 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 GDAP2Q9NXN4 497 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 PTTG2Q9NZH5 202 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 HSFX1Q9UBD0 423 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 HMGXB4Q9UGU5 601 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 STXBP5LQ9Y2K9 1186 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 PCDHB4Q9Y5E5 795 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 CHD7Q9P2D1 2997 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 COL4A4P53420 1690 aaPredicted RBP11.85□□□□□ -0.51
CECR3-201ENST00000428828 LINC01553A4QN01 128 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 TMEM189-UBE2V1I3L0A0 370 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 MAP3K7O43318 606 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 GFPT2O94808 682 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 CALCAP01258 141 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 TKTP29401 623 aaKnown RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 CTNNB1P35222 781 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 IFNAR2P48551 515 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 HPCAP84074 193 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 CCDC6Q16204 474 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 FAM171A1Q5VUB5 890 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 WSCD1Q658N2 575 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 TMEM270Q6UE05 265 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 LRRC74BQ6ZQY2 392 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 RGS9BPQ6ZS82 235 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 VSIG1Q86XK7 387 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 OR6B3Q8NGW1 331 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 NAT14Q8WUY8 206 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 WDR60Q8WVS4 1066 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 TMEM169Q96HH4 297 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 IGSF21Q96ID5 467 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 C17orf80Q9BSJ5 609 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 STK33Q9BYT3 514 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 GPR88Q9GZN0 384 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 TIMMDC1Q9NPL8 285 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 YBX2Q9Y2T7 364 aaKnown RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 TMED5Q9Y3A6 229 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 ACTL7BQ9Y614 415 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.51
CECR3-201ENST00000428828 FOXN3O00409 490 aaPredicted RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 ZNF189O75820 626 aaPredicted RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 RARGP13631 454 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 JAM2P57087 298 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 RPL26P61254 145 aaKnown RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 CGB2Q6NT52 195 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 PPP1R21Q6ZMI0 780 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 ENOSF1Q7L5Y1 443 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 ZC3H18Q86VM9 953 aaKnown RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 ST13P4Q8IZP2 240 aaPredicted RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 SLC39A11Q8N1S5 342 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 TOP6BLQ8N6T0 577 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 KBTBD7Q8WVZ9 684 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 SUSD3Q96L08 255 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 LRRC37BQ96QE4 947 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 MYLK2Q9H1R3 596 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 SNX25Q9H3E2 840 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 SPG21Q9NZD8 308 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 MTRF1LQ9UGC7 380 aaKnown RBP11.84□□□□□ -0.51
CECR3-201ENST00000428828 GGT7Q9UJ14 662 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 RASAL2Q9UJF2 1139 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 SSX2IPQ9Y2D8 614 aa11.84□□□□□ -0.51
CECR3-201ENST00000428828 PTPRDP23468 1912 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 A8MXQ7 604 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 M0QZQ0 153 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 TCEA3O75764 348 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 CYP1A1P04798 512 aaPredicted RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 PDGFRBP09619 1106 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 LINC00271P0C7V0 271 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 ACAT1P24752 427 aaKnown RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 BMP8BP34820 402 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 CA8P35219 290 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 STAT1P42224 750 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 ACADVLP49748 655 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 NDST1P52848 882 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 YWHAEP62258 255 aaKnown RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 SPIDRQ14159 915 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 SLC29A2Q14542 456 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 TDRD12Q587J7 1177 aaKnown RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 ARHGEF18Q6ZSZ5 1173 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 NCCRP1Q6ZVX7 275 aaPredicted RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 TRMT10CQ7L0Y3 403 aaKnown RBP11.83□□□□□ -0.52
CECR3-201ENST00000428828 DPH6Q7L8W6 267 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 TAS1R1Q7RTX1 841 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 OSTM1Q86WC4 334 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 SHC3Q92529 594 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
CECR3-201ENST00000428828 TWNKQ96RR1 684 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms