RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CKAP5Q14008 2032 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 CFAP47Q6ZTR5 3102 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 E7ENQ6 273 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 RNF225M0QZC1 329 aaPredicted RBP16.25■□□□□ 0.19
SEC13-210ENST00000428626 GFRA2O00451 464 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 XPO1O14980 1071 aaKnown RBP16.25■□□□□ 0.19
SEC13-210ENST00000428626 AP5Z1O43299 807 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 BCAT1P54687 386 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 ZNF33AQ06730 810 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 ADIGQ0VDE8 80 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 ENPP2Q13822 863 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 TRIP4Q15650 581 aaPredicted RBP16.25■□□□□ 0.19
SEC13-210ENST00000428626 ST3GAL2Q16842 350 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 FUT11Q495W5 492 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 SGO2Q562F6 1265 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 DEFB124Q8NES8 71 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 OR2I1PQ8NGU4 316 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 SORCS1Q8WY21 1168 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 EDEM1Q92611 657 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 TSG101Q99816 390 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 DCLK3Q9C098 648 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 MKRN2Q9H000 416 aaKnown RBP16.25■□□□□ 0.19
SEC13-210ENST00000428626 FAM124BQ9H5Z6 455 aaPredicted RBP16.25■□□□□ 0.19
SEC13-210ENST00000428626 CAPN10Q9HC96 672 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 THAP10Q9P2Z0 257 aaPredicted RBP16.25■□□□□ 0.19
SEC13-210ENST00000428626 ARMCX3Q9UH62 379 aaPredicted RBP16.25■□□□□ 0.19
SEC13-210ENST00000428626 SFMBT1Q9UHJ3 866 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 ZNF510Q9Y2H8 683 aa16.25■□□□□ 0.19
SEC13-210ENST00000428626 CFIP05156 583 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 CD19P15391 556 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 SPINK2P20155 84 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 CSRP1P21291 193 aaKnown RBP16.24■□□□□ 0.19
SEC13-210ENST00000428626 CHKAP35790 457 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 FMO5P49326 533 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 LRRC63Q05C16 580 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 ZNF252P-AS1Q0IIN9 211 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 BST2Q10589 180 aaKnown RBP16.24■□□□□ 0.19
SEC13-210ENST00000428626 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 RSRC2Q7L4I2 434 aaKnown RBP16.24■□□□□ 0.19
SEC13-210ENST00000428626 FMNL3Q8IVF7 1028 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 ARHGAP18Q8N392 663 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 CPXM2Q8N436 756 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 LMO3Q8TAP4 145 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 HSPA12BQ96MM6 686 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 NUSAP1Q9BXS6 441 aaKnown RBP16.24■□□□□ 0.19
SEC13-210ENST00000428626 DNAI2Q9GZS0 605 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 MAN1B1Q9UKM7 699 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 NUMA1Q14980 2115 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 CHD6Q8TD26 2715 aa16.24■□□□□ 0.19
SEC13-210ENST00000428626 KCNJ18B7U540 433 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 PIK3R2O00459 728 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 MSI1O43347 362 aaKnown RBP16.23■□□□□ 0.19
SEC13-210ENST00000428626 ZNF217O75362 1048 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 SMC2O95347 1197 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 VDRP11473 427 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 HOXD9P28356 352 aaPredicted RBP16.23■□□□□ 0.19
SEC13-210ENST00000428626 SGSHP51688 502 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 LMAN2Q12907 356 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 BSPRYQ5W0U4 402 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 TTI2Q6NXR4 508 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 PMF1Q6P1K2 205 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 KIAA1324Q6UXG2 1013 aaKnown RBP16.23■□□□□ 0.19
SEC13-210ENST00000428626 SLC36A4Q6YBV0 504 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 TRIML1Q8N9V2 468 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 PLD4Q96BZ4 506 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 ZNF419Q96HQ0 510 aaPredicted RBP16.23■□□□□ 0.19
SEC13-210ENST00000428626 TIGD1Q96MW7 591 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 LRRC4Q9HBW1 653 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 STRIP2Q9ULQ0 834 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 SLC6A14Q9UN76 642 aa16.23■□□□□ 0.19
SEC13-210ENST00000428626 MUC22E2RYF6 1773 aaPredicted RBP16.23■□□□□ 0.19
SEC13-210ENST00000428626 KNL1Q8NG31 2342 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 PPP1R3GB7ZBB8 358 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 TSPAN3O60637 253 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 SERPINF2P08697 491 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 CEACAM1P13688 526 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 PRKCHP24723 683 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 MAOBP27338 520 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 HOXD12P35452 270 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 RGS7P49802 495 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 COPAP53621 1224 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 DAOAP59103 153 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 FOXC1Q12948 553 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 ZNF234Q14588 700 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 DUOXA1Q1HG43 343 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 TMEM270Q6UE05 265 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 LCLAT1Q6UWP7 414 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 ANKS1BQ7Z6G8 1248 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 PIP4P1Q86T03 277 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 CLEC4CQ8WTT0 213 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 SLC35F5Q8WV83 523 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 KCTD13Q8WZ19 329 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 ELOVL2Q9NXB9 296 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 USP36Q9P275 1121 aaKnown RBP16.22■□□□□ 0.19
SEC13-210ENST00000428626 HESX1Q9UBX0 185 aa16.22■□□□□ 0.19
SEC13-210ENST00000428626 SPEGQ15772 3267 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 GOLGA6L4A6NEF3 574 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms