RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CXorf21Q9HAI6 301 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SAYSD1Q9NPB0 183 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TCF7L2Q9NQB0 619 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAN1C1Q9NR34 630 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SEPT11Q9NVA2 429 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 RIC8BQ9NVN3 520 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 COMMD8Q9NX08 183 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 GPRC5DQ9NZD1 345 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAP10Q9P2G4 905 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 KCNN3Q9UGI6 736 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 IPO11Q9UI26 975 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 MID2Q9UJV3 735 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 ADAMTS6Q9UKP5 1117 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 POMPQ9Y244 141 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 DNAJC16Q9Y2G8 782 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TMA7Q9Y2S6 64 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 MARF1Q9Y4F3 1742 aaKnown RBP5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 TESMINQ9Y4I5 508 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 SPEF1Q9Y4P9 236 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 CPQQ9Y646 472 aa5.78□□□□□ -1.48
VTI1BP4-201ENST00000427516 LRP5O75197 1615 aa5.77□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF536O15090 1300 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ADGRA2Q96PE1 1338 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 UBR1Q8IWV7 1749 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARPC4-TTLL3A0A0A6YYG9 625 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ESYT2A0FGR8 921 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 H3BMQ9 156 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TAF4O00268 1085 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SULT1B1O43704 296 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 MARCH6O60337 910 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 USP1O94782 785 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CAPNS1P04632 268 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ITGB3P05106 788 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ABCB1P08183 1280 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 INHBBP09529 407 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRAPPC2P0DI81 140 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRAPPC2BP0DI82 140 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 MYL6BP14649 208 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TATP17735 454 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 COMTP21964 271 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 IL4RP24394 825 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ADRA1DP25100 572 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CD40LGP29965 261 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PSMC2P35998 433 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 NAMPTP43490 491 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 STT3AP46977 705 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 EPHB1P54762 984 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 NME5P56597 212 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PHC1P78364 1004 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 MRPS15P82914 257 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 MRPS9P82933 396 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SCRN3Q0VDG4 424 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 BST2Q10589 180 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ILF2Q12905 390 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 FOXD4Q12950 439 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 GRM1Q13255 1194 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ITGADQ13349 1161 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF211Q13398 564 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 NAB1Q13506 487 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCNIQ14094 377 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 LRP8Q14114 963 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SQLEQ14534 574 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 RFTN1Q14699 578 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 EFTUD2Q15029 972 aaKnown RBP eCLIP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC1A5Q15758 541 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CALCRLQ16602 461 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 HIF1AQ16665 826 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF181Q2M3W8 571 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 TYSND1Q2T9J0 566 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 LETM2Q2VYF4 491 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PLA2G4EQ3MJ16 856 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 DCAF6Q58WW2 860 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 EARS2Q5JPH6 523 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 METTL24Q5JXM2 366 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PPM1LQ5SGD2 360 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ITPRIPL1Q6GPH6 555 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CYP4F22Q6NT55 531 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF544Q6NX49 715 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 FBXL19Q6PCT2 694 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 IYDQ6PHW0 289 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ABRAXAS1Q6UWZ7 409 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CYP4V2Q6ZWL3 525 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 COPS6Q7L5N1 327 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 VASH1Q7L8A9 365 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ADAT2Q7Z6V5 191 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 AMIGO2Q86SJ2 522 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 USP37Q86T82 979 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CARM1Q86X55 608 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 GLYCTKQ8IVS8 523 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANKRD13AQ8IZ07 590 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PDIK1LQ8N165 341 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SIX5Q8N196 739 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 C4orf33Q8N1A6 199 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 CPSF7Q8N684 471 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANKRD53Q8N9V6 530 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 PIK3C3Q8NEB9 887 aa5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 NGDNQ8NEJ9 315 aaKnown RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF564Q8TBZ8 553 aaPredicted RBP5.77□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC2A14Q8TDB8 520 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms