RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CPXM2Q8N436 756 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 C12orf50Q8NA57 414 aaPredicted RBP19.24■□□□□ 0.67
GPC1-205ENST00000427506 LMBRD1Q9NUN5 540 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 GTPBP10A4D1E9 387 aaKnown RBP19.23■□□□□ 0.67
GPC1-205ENST00000427506 TSPAN3O60637 253 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 PON1P27169 355 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 ACADSBP45954 432 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 APBA1Q02410 837 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 MPPE1Q53F39 396 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 SCUBE3Q8IX30 993 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 FAM149B1Q96BN6 582 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 SPACA7Q96KW9 195 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 GBP4Q96PP9 640 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 ACOX2Q99424 681 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 ACP6Q9NPH0 428 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 DLL3Q9NYJ7 618 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 FBXO10Q9UK96 956 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 HCN2Q9UL51 889 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 PCDHGA5Q9Y5G8 931 aa19.23■□□□□ 0.67
GPC1-205ENST00000427506 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.22■□□□□ 0.67
GPC1-205ENST00000427506 PES1O00541 588 aaKnown RBP19.22■□□□□ 0.67
GPC1-205ENST00000427506 MAP3K13O43283 966 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 SART1O43290 800 aaKnown RBP19.22■□□□□ 0.67
GPC1-205ENST00000427506 NCAM1P13591 858 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 CREB5Q02930 508 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 BYSLQ13895 437 aaKnown RBP19.22■□□□□ 0.67
GPC1-205ENST00000427506 AASDHQ4L235 1098 aaPredicted RBP19.22■□□□□ 0.67
GPC1-205ENST00000427506 MSANTD2Q6P1R3 559 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 FAM217AQ8IXS0 508 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 RLN3Q8WXF3 142 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 ERLEC1Q96DZ1 483 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 P2RY11Q96G91 374 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 TUBGCP2Q9BSJ2 902 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 NDST4Q9H3R1 872 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 SLC27A6Q9Y2P4 619 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 WDR87Q6ZQQ6 2873 aa19.22■□□□□ 0.67
GPC1-205ENST00000427506 FRYLO94915 3013 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 CAPN9O14815 690 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 ZNF806P0C7X5 589 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 BCKDHBP21953 392 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 MPLP40238 635 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 TBX4P57082 545 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 FOXK2Q01167 660 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 SF3A2Q15428 464 aaKnown RBP19.21■□□□□ 0.67
GPC1-205ENST00000427506 MEA1Q16626 185 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 VWA3BQ502W6 1294 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 UNC45BQ8IWX7 931 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 OLIG1Q8TAK6 271 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 NETO1Q8TDF5 533 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 UCMAQ8WVF2 138 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 TMA16Q96EY4 203 aaKnown RBP19.21■□□□□ 0.67
GPC1-205ENST00000427506 CACNA2D2Q9NY47 1150 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 DNAJC12Q9UKB3 198 aa19.21■□□□□ 0.67
GPC1-205ENST00000427506 BECN2A8MW95 431 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 LATS1O95835 1130 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 GABRG2P18507 467 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 P2RY2P41231 377 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 SLC11A2P49281 568 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 DHPSP49366 369 aaPredicted RBP19.2■□□□□ 0.66
GPC1-205ENST00000427506 ATXN1P54253 815 aaKnown RBP19.2■□□□□ 0.66
GPC1-205ENST00000427506 ZNF445P59923 1031 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 GEN1Q17RS7 908 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 ADGRF1Q5T601 910 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 NUGGCQ68CJ6 796 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 PMS2CLQ68D20 193 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 ANKS1BQ7Z6G8 1248 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 STK32AQ8WU08 396 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 SHC3Q92529 594 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 TRIM62Q9BVG3 475 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 SLC4A5Q9BY07 1137 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 SLC2A11Q9BYW1 496 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 SMOC1Q9H4F8 434 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 VPS45Q9NRW7 570 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 EML5Q05BV3 1969 aa19.2■□□□□ 0.66
GPC1-205ENST00000427506 A0A1W2PQF6 199 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 KCNJ18B7U540 433 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 E5RJQ4 531 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 GOLGA6L22H0YM25 854 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 GFRA2O00451 464 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 GDF9O60383 454 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 CAVIN2O95810 425 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 RPL34P49207 117 aaKnown RBP19.19■□□□□ 0.66
GPC1-205ENST00000427506 ARID5AQ03989 594 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 PTK2Q05397 1052 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 KCNJ12Q14500 433 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 E2F5Q15329 346 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 CT47A1Q5JQC4 288 aaPredicted RBP19.19■□□□□ 0.66
GPC1-205ENST00000427506 LPCAT2Q7L5N7 544 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 IPO4Q8TEX9 1081 aaKnown RBP19.19■□□□□ 0.66
GPC1-205ENST00000427506 PIWIL1Q96J94 861 aaKnown RBP19.19■□□□□ 0.66
GPC1-205ENST00000427506 SERPINB11Q96P15 392 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 GABRG3Q99928 467 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 RTKNQ9BST9 563 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 CIPCQ9C0C6 399 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 SAMSN1Q9NSI8 373 aaKnown RBP19.19■□□□□ 0.66
GPC1-205ENST00000427506 CYTH4Q9UIA0 394 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 STOML2Q9UJZ1 356 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 CLEC4EQ9ULY5 219 aa19.19■□□□□ 0.66
GPC1-205ENST00000427506 NAALADL1Q9UQQ1 740 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms