RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ATRIPQ8WXE1 791 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 DNAAF4Q8WXU2 420 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 FAM136AQ96C01 138 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 VRK1Q99986 396 aaPredicted RBP5.68□□□□□ -1.5
LINC00458-202ENST00000427299 WACQ9BTA9 647 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 BRIP1Q9BX63 1249 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 HMG20BQ9P0W2 317 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 KIF3AQ9Y496 699 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 PCDHA3Q9Y5H8 950 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 ELP1O95163 1332 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 ARAP2Q8WZ64 1704 aa5.68□□□□□ -1.5
LINC00458-202ENST00000427299 MST1RQ04912 1400 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PXDNQ92626 1479 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PNMA6EA0A0J9YXQ4 647 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 CAPN8A6NHC0 703 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PRSS29PA6NIE9 313 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 ZNF785A8K8V0 405 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 MYO1FO00160 1098 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PPEF2O14830 753 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 SOAT2O75908 522 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 CAVIN2O95810 425 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 TUBB4AP04350 444 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 GJB1P08034 283 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 FTH1P19P0C7X4 201 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 CYP2D6P10635 497 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 NDUFB7P17568 137 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 TOB1P50616 345 aaPredicted RBP5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PSMC1P62191 440 aaKnown RBP5.67□□□□□ -1.5
LINC00458-202ENST00000427299 RAB1AP62820 205 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 GPSM2P81274 684 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 TEFQ10587 303 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 HABP2Q14520 560 aaPredicted RBP5.67□□□□□ -1.5
LINC00458-202ENST00000427299 KRT32Q14532 448 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PLS1Q14651 629 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 CNN3Q15417 329 aaKnown RBP5.67□□□□□ -1.5
LINC00458-202ENST00000427299 C10orf62Q5T681 223 aaPredicted RBP5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PRAMEF17Q5VTA0 474 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 SLC29A4Q7RTT9 530 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 HEATR3Q7Z4Q2 680 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 FAM90A1Q86YD7 464 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 KRT78Q8N1N4 520 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 PIBF1Q8WXW3 757 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 CNPPD1Q9BV87 410 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 NAA15Q9BXJ9 866 aaKnown RBP5.67□□□□□ -1.5
LINC00458-202ENST00000427299 BRD9Q9H8M2 597 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 GPR35Q9HC97 309 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 SERHLQ9NQF3 203 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 CYP46A1Q9Y6A2 500 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 GLI3P10071 1580 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 COL15A1P39059 1388 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 MED23Q9ULK4 1368 aa5.67□□□□□ -1.5
LINC00458-202ENST00000427299 MYH6P13533 1939 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 MYH2Q9UKX2 1941 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 ABCA3Q99758 1704 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 PRRT4C9JH25 899 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 GOLIM4O00461 696 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 PMM2O15305 246 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 FRS3O43559 492 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 SURF6O75683 361 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 IFIT2P09913 472 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 FAM163BP0C2L3 166 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 CCDC192P0DO97 292 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 ITGALP20701 1170 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 CASTP20810 708 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 PRDX5P30044 214 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 CD6P30203 668 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 CACNB3P54284 484 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 FOXG1P55316 489 aaPredicted RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 MORC3Q14149 939 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 AARS2Q5JTZ9 985 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 C1orf141Q5JVX7 400 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 DNTTIP2Q5QJE6 756 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 ZNF618Q5T7W0 954 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 TEDDM1Q5T9Z0 273 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 RNF220Q5VTB9 566 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 AWAT2Q6E213 333 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 IL31Q6EBC2 164 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 ANKRD16Q6P6B7 361 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 DARS2Q6PI48 645 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 SLC2A7Q6PXP3 512 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 APOA5Q6Q788 366 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 CCDC149Q6ZUS6 474 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 G2E3Q7L622 706 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 PPP1R42Q7Z4L9 355 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 DAAM2Q86T65 1068 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 TICAM2Q86XR7 235 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 TTC14Q96N46 770 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 NT5C1BQ96P26 610 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 LSG1Q9H089 658 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 ECHDC1Q9NTX5 307 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 DDX19AQ9NUU7 478 aaKnown RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 PNPOQ9NVS9 261 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 DBF4Q9UBU7 674 aaPredicted RBP5.66□□□□□ -1.5
LINC00458-202ENST00000427299 SNX14Q9Y5W7 946 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 NPHP3Q7Z494 1330 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 ADCY9O60503 1353 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 CACNA1IQ9P0X4 2223 aa5.66□□□□□ -1.5
LINC00458-202ENST00000427299 COL18A1P39060 1754 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms