RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 KIF12Q96FN5 646 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 OTUD5Q96G74 571 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 DNAJC16Q9Y2G8 782 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 HBS1LQ9Y450 684 aaKnown RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF638Q14966 1978 aaKnown RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 CCDC78A2IDD5 438 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 CAPN14A8MX76 684 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 E7ENQ6 273 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 TGDSO95455 350 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 VDRP11473 427 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 INSRRP14616 1297 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 GABRB2P47870 512 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 TMEM132DQ14C87 1099 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 IZUMO2Q6UXV1 221 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 MAP7D3Q8IWC1 876 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 KHSRPQ92945 711 aaKnown RBP eCLIP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 OXCT2Q9BYC2 517 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 PDZD7Q9H5P4 517 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 NRDE2Q9H7Z3 1164 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 PNPOQ9NVS9 261 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 DPP3Q9NY33 737 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 BARX2Q9UMQ3 279 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 MRPL42Q9Y6G3 142 aaKnown RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 SOCS7O14512 581 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 TPP1O14773 563 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 CCDC130P13994 396 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 STX3Q13277 289 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 FAM47CQ5HY64 1035 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 CELF3Q5SZQ8 465 aaKnown RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 N4BP2L1Q5TBK1 243 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 FAM131BQ86XD5 332 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 TEKT4Q8WW24 435 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 AZIN2Q96A70 460 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 FRMD8P1Q9BZ68 369 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 ZCWPW1Q9H0M4 648 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 C2orf40Q9H1Z8 148 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 MAN1C1Q9NR34 630 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 IGKV6-21A0A0C4DH24 114 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 SPECC1L-ADORA2AF8WAN1 911 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 ADCY6O43306 1168 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 KRT38O76015 456 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 NPTXRO95502 500 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 LMNAP02545 664 aaKnown RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 GNAT1P11488 350 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 GOT1P17174 413 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 ARRB2P32121 409 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 PITX1P78337 314 aaPredicted RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 EML3Q32P44 896 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 FOXB2Q5VYV0 432 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 OLFML1Q6UWY5 402 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 CMC1Q7Z7K0 106 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 SPNS2Q8IVW8 549 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 SULF1Q8IWU6 871 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 TNS4Q8IZW8 715 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 NT5C1AQ9BXI3 368 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 GBA2Q9HCG7 927 aaPredicted RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 XAB2Q9HCS7 855 aaKnown RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 G3BP2Q9UN86 482 aaKnown RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 TNFSF13BQ9Y275 285 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 SMAPO00193 183 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 IRF6O14896 467 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 MAP3K7O43318 606 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 BPGMP07738 259 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 MRPS35P82673 323 aaKnown RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 KRT72Q14CN4 511 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 ATG16L1Q676U5 607 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 SESTD1Q86VW0 696 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 GSDMBQ8TAX9 411 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 NLRP7Q8WX94 980 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 C18orf25Q96B23 403 aaPredicted RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 PGBD4Q96DM1 585 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 AGAP3Q96P47 875 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 KCNK4Q9NYG8 393 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 SIRPGQ9P1W8 387 aa14.85□□□□□ -0.03
ERCC3-202ENST00000426778 STX18Q9P2W9 335 aaKnown RBP14.85□□□□□ -0.03
ERCC3-202ENST00000426778 ALDOAP04075 364 aaKnown RBP14.84□□□□□ -0.03
ERCC3-202ENST00000426778 ERVK-10P10266 1014 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 VAV1P15498 845 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 EDNRBP24530 442 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 PRKCHP24723 683 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 MGAT1P26572 445 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 MLH1P40692 756 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 POLE2P56282 527 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 PDE1BQ01064 536 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 SOWAHAQ2M3V2 549 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 TMPRSS6Q8IU80 811 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 PPFIBP2Q8ND30 876 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 OR6B3Q8NGW1 331 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 MTBPQ96DY7 904 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 FAM167AQ96KS9 214 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 FGD4Q96M96 766 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 TSC22D3Q99576 134 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 EBNA1BP2Q99848 306 aaKnown RBP14.84□□□□□ -0.03
ERCC3-202ENST00000426778 ELP3Q9H9T3 547 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 C2CD2Q9Y426 696 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 USP2O75604 605 aaPredicted RBP14.84□□□□□ -0.03
ERCC3-202ENST00000426778 SKIP12755 728 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 ANPEPP15144 967 aa14.84□□□□□ -0.03
ERCC3-202ENST00000426778 RXRBP28702 533 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms