RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TXNDC9O14530 226 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 OPHN1O60890 802 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 ARIH2O95376 493 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PROCP04070 461 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PGK2P07205 417 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 GSTA2P09210 222 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SERPINB6P35237 376 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 GABRB2P47870 512 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SLC1A6P48664 564 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 ASPHQ12797 758 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PPM1JQ5JR12 505 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 LPCAT4Q643R3 524 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 CWF19L1Q69YN2 538 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 DPY19L2Q6NUT2 758 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 METTL7BQ6UX53 244 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 ACOT1Q86TX2 421 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 MYLK4Q86YV6 388 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 AGR3Q8TD06 166 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 COPS5Q92905 334 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 ATXN7L3BQ96GX2 97 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 FRMD8Q9BZ67 464 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PTPRHQ9HD43 1115 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 RNF19AQ9NV58 838 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 STK32BQ9NY57 414 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SEPT10Q9P0V9 454 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 CPSF2Q9P2I0 782 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 MAGED2Q9UNF1 606 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 A6NJR5 290 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 LGR5O75473 907 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SNUPNO95149 360 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 IL1BP01584 269 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 F7P08709 466 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 TGM2P21980 687 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 WASHC5Q12768 1159 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SLC10A2Q12908 348 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 RAPH1Q70E73 1250 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PIWIL2Q8TC59 973 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 FAM167AQ96KS9 214 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SPATA33Q96N06 139 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 LPIN3Q9BQK8 851 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 NT5C1AQ9BXI3 368 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 R3HDMLQ9H3Y0 253 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 FZD8Q9H461 694 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 NRDE2Q9H7Z3 1164 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PACSIN3Q9UKS6 424 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 BARX2Q9UMQ3 279 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 A0A088AWK7 358 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 BCLAF3A2AJT9 711 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SDR42E2A6NKP2 422 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 FAM159BA6NKW6 160 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 TPP1O14773 563 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SNNO75324 88 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 IL18RAPO95256 599 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 CCNFP41002 786 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 ROR2Q01974 943 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 CDC16Q13042 620 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 EFHC1Q5JVL4 640 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 FAM91A1Q658Y4 838 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 HEATR6Q6AI08 1181 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 CDKL3Q8IVW4 592 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 APLFQ8IW19 511 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 GALNT15Q8N3T1 639 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 CHST13Q8NET6 341 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PPP4R1Q8TF05 950 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 KCNN1Q92952 543 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 EBF3Q9H4W6 596 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF358Q9NW07 568 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 TXNDC16Q9P2K2 825 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 G3BP2Q9UN86 482 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 MFHAS1Q9Y4C4 1052 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 PCDHA11Q9Y5I1 949 aa7.77□□□□□ -1.17
SMARCC1-202ENST00000425518 SYNJ2BP-COX16A0A087WUM0 186 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 DESP17661 470 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 PROZP22891 400 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 SERPINB9P50453 376 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 COPAP53621 1224 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 TCHHL1Q5QJ38 904 aaPredicted RBP7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 TEDDM1Q5T9Z0 273 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ISLR2Q6UXK2 745 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 C10orf107Q8IVU9 208 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ATP2A3Q93084 1043 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 PGLYRP2Q96PD5 576 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 IFT122Q9HBG6 1241 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 MAN1C1Q9NR34 630 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 COX16Q9P0S2 106 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 PDP2Q9P2J9 529 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 GINS2Q9Y248 185 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 A0A087WZ62 844 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ZBTB42B2RXF5 422 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 BIRC5O15392 142 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 TYK2P29597 1187 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 CUL3Q13618 768 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 TMEM132DQ14C87 1099 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 AMHR2Q16671 573 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 SLC10A6Q3KNW5 377 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 TREML2Q5T2D2 321 aa7.76□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF534Q76KX8 674 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms