RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 ZBED1O96006 694 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 VDRP11473 427 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 HOXB2P14652 356 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 FMO5P49326 533 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 DGKGP49619 791 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 YWHAGP61981 247 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDR1-234ENST00000424544 EFEMP1Q12805 493 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 TRIP4Q15650 581 aaPredicted RBP16.93■□□□□ 0.3
DDR1-234ENST00000424544 DCAF17Q5H9S7 520 aaPredicted RBP16.93■□□□□ 0.3
DDR1-234ENST00000424544 N4BP2L1Q5TBK1 243 aaPredicted RBP16.93■□□□□ 0.3
DDR1-234ENST00000424544 TCERG1LQ5VWI1 586 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 KIAA1211LQ6NV74 962 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 LPCAT2Q7L5N7 544 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 DHX40Q8IX18 779 aaKnown RBP16.93■□□□□ 0.3
DDR1-234ENST00000424544 CPXM2Q8N436 756 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 AOPEPQ8N6M6 819 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 IPO4Q8TEX9 1081 aaKnown RBP16.93■□□□□ 0.3
DDR1-234ENST00000424544 SLC35F5Q8WV83 523 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 NDRG1Q92597 394 aaKnown RBP16.93■□□□□ 0.3
DDR1-234ENST00000424544 PIWIL1Q96J94 861 aaKnown RBP16.93■□□□□ 0.3
DDR1-234ENST00000424544 CEP63Q96MT8 703 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 PLK2Q9NYY3 685 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 STOML2Q9UJZ1 356 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 PILRBQ9UKJ0 227 aa16.93■□□□□ 0.3
DDR1-234ENST00000424544 CACNA1BQ00975 2339 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 ASCC3Q8N3C0 2202 aaKnown RBP16.92■□□□□ 0.3
DDR1-234ENST00000424544 TNRC6BQ9UPQ9 1833 aaKnown RBP16.92■□□□□ 0.3
DDR1-234ENST00000424544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 PCNX2A6NKB5 2137 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 RNF225M0QZC1 329 aaPredicted RBP16.92■□□□□ 0.3
DDR1-234ENST00000424544 C7P10643 843 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 PMLP29590 882 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 CORO1AP31146 461 aaKnown RBP16.92■□□□□ 0.3
DDR1-234ENST00000424544 WASP42768 502 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 DHPSP49366 369 aaPredicted RBP16.92■□□□□ 0.3
DDR1-234ENST00000424544 BCAT1P54687 386 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 MFAP3P55082 362 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 NCAPHQ15003 741 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 SGO2Q562F6 1265 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 LCLAT1Q6UWP7 414 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 CYP2U1Q7Z449 544 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 SYT12Q8IV01 421 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 TMEFF1Q8IYR6 380 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 CHPFQ8IZ52 775 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 TFAP2BQ92481 460 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 SPACA7Q96KW9 195 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 EDEM2Q9BV94 578 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 ULBP1Q9BZM6 244 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 CALCOCO1Q9P1Z2 691 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 BCCIPQ9P287 314 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDR1-234ENST00000424544 CLEC4EQ9ULY5 219 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 NFE2L3Q9Y4A8 694 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 ASPMQ8IZT6 3477 aa16.92■□□□□ 0.3
DDR1-234ENST00000424544 WASH3PC4AMC7 463 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 P4HA2O15460 535 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 PAEPP09466 180 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 TBXAS1P24557 533 aaPredicted RBP16.91■□□□□ 0.3
DDR1-234ENST00000424544 SLC8A3P57103 927 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 YWHAEP62258 255 aaKnown RBP16.91■□□□□ 0.3
DDR1-234ENST00000424544 BST2Q10589 180 aaKnown RBP16.91■□□□□ 0.3
DDR1-234ENST00000424544 CNGA2Q16280 664 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 GEN1Q17RS7 908 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 GOLGA7BQ2TAP0 167 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 BSPRYQ5W0U4 402 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 SLC23A3Q6PIS1 610 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 METTL3Q86U44 580 aaKnown RBP16.91■□□□□ 0.3
DDR1-234ENST00000424544 LUZP1Q86V48 1076 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 RNF214Q8ND24 703 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 UBA3Q8TBC4 463 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 PIGKQ92643 395 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 MRGPRX1Q96LB2 322 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 RBSNQ9H1K0 784 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 THAP9Q9H5L6 903 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 FANCLQ9NW38 375 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 THAP10Q9P2Z0 257 aaPredicted RBP16.91■□□□□ 0.3
DDR1-234ENST00000424544 RASAL2Q9UJF2 1139 aa16.91■□□□□ 0.3
DDR1-234ENST00000424544 KMT2BQ9UMN6 2715 aaPredicted RBP16.91■□□□□ 0.3
DDR1-234ENST00000424544 IGHV1OR15-9A0A0B4J2B8 117 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 SLC12A8A0AV02 714 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 YJEFN3A6XGL0 299 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 E7ENQ6 273 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 NPC1O15118 1278 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 MAP3K13O43283 966 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 GNA14O95837 355 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 NDUFV2P19404 249 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 HOXD12P35452 270 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 RPL34P49207 117 aaKnown RBP16.9■□□□□ 0.3
DDR1-234ENST00000424544 ZNF132P52740 706 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 MARSP56192 900 aaKnown RBP16.9■□□□□ 0.3
DDR1-234ENST00000424544 TPM4P67936 248 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 SHC2P98077 582 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 LRMPQ12912 555 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 SDE2Q6IQ49 451 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 SLC36A4Q6YBV0 504 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 DENND1CQ8IV53 801 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 PGBD3Q8N328 593 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 BHMTQ93088 406 aa16.9■□□□□ 0.3
DDR1-234ENST00000424544 PLD4Q96BZ4 506 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms