RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NCOA4Q13772 614 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 CNNM4Q6P4Q7 775 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 DHRS13Q6UX07 377 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 CLEC20AQ6ZU45 233 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 ANKS1BQ7Z6G8 1248 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 TADA2BQ86TJ2 420 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 C12orf29Q8N999 325 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 OR2T3Q8NH03 318 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 PLEKHO2Q8TD55 490 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 HNRNPABQ99729 332 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 C6orf106Q9H6K1 298 aaPredicted RBP17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 TM9SF3Q9HD45 589 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 CGNQ9P2M7 1197 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 CKAP5Q14008 2032 aa17.59■□□□□ 0.41
CHCHD3-202ENST00000423635 UBE4BO95155 1302 aa17.58■□□□□ 0.41
CHCHD3-202ENST00000423635 EPHX1P07099 455 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 FAM200BP0CF97 657 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 ITPKBP27987 946 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 ACSL1P33121 698 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 EIF2S3P41091 472 aaKnown RBP17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 CASP4P49662 377 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 CCT8P50990 548 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 NDST1P52848 882 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 COG7P83436 770 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 BIRC3Q13489 604 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 CAMK2GQ13555 558 aaPredicted RBP17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 C10orf120Q5SQS8 335 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 TMEM215Q68D42 235 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 SCD5Q86SK9 330 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 FAM124AQ86V42 546 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 PDILTQ8N807 584 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 PIP4K2CQ8TBX8 421 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 DCBLD2Q96PD2 775 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 SLC2A11Q9BYW1 496 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 DCLK3Q9C098 648 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 CLIC5Q9NZA1 410 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 CLEC4EQ9ULY5 219 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 PCDHGA1Q9Y5H4 931 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 MYH10P35580 1976 aa17.58■□□□□ 0.4
CHCHD3-202ENST00000423635 H0Y8X5 98 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 PLK4O00444 970 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 KCNK3O14649 394 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 DFNA5O60443 496 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 TSPAN3O60637 253 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 VNN1O95497 513 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 P4HA1P13674 534 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 KIF11P52732 1056 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 AMPD3Q01432 767 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 SLC39A14Q15043 492 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 E2F4Q16254 413 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 SGSM1Q2NKQ1 1148 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 FAM26FQ5R3K3 315 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 SCARA5Q6ZMJ2 495 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 PARD3BQ8TEW8 1205 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 SNX19Q92543 992 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 ELMO3Q96BJ8 720 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 BIRC7Q96CA5 298 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 FAM49BQ9NUQ9 324 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 HMGXB4Q9UGU5 601 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 AGO1Q9UL18 857 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 USP3Q9Y6I4 520 aa17.57■□□□□ 0.4
CHCHD3-202ENST00000423635 NUMA1Q14980 2115 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 LRRIQ3A6PVS8 624 aaPredicted RBP17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CDK4P11802 303 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CD27P26842 260 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CTSKP43235 329 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CEBPZQ03701 1054 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 EHHADHQ08426 723 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 KCNT1Q5JUK3 1230 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 FAM173BQ6P4H8 233 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 SERPINA13PQ6UXR4 307 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CCDC186Q7Z3E2 898 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 NELFCDQ8IXH7 590 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CPXM2Q8N436 756 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 SORCS1Q8WY21 1168 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 NXPE2Q96DL1 559 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CDK5RAP1Q96SZ6 601 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CIPCQ9C0C6 399 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 LHX5Q9H2C1 402 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 TMEM245Q9H330 911 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 CUEDC2Q9H467 287 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 NAGPAQ9UK23 515 aa17.56■□□□□ 0.4
CHCHD3-202ENST00000423635 VPS37CA5D8V6 355 aaPredicted RBP17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 EXOC3O60645 756 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 CYBBP04839 570 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 RPN1P04843 607 aaKnown RBP17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 RALAP11233 206 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 ADORA2BP29275 332 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 CORO1AP31146 461 aaKnown RBP17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 ASIC1P78348 528 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 ZBTB16Q05516 673 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 PDE4CQ08493 712 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 INAVAQ3KP66 663 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 C8orf34Q49A92 452 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 C6orf118Q5T5N4 469 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 LRRC69Q6ZNQ3 347 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 CACUL1Q86Y37 369 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 FAM217AQ8IXS0 508 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 TAF4BQ92750 862 aa17.55■□□□□ 0.4
CHCHD3-202ENST00000423635 CYFIP2Q96F07 1278 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms