RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 RPLP0P6Q8NHW5 317 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 SERPINB11Q96P15 392 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 PHOX2BQ99453 314 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 NAA15Q9BXJ9 866 aaKnown RBP11.42□□□□□ -0.58
USP49-204ENST00000423567 DNAJC17Q9NVM6 304 aaKnown RBP11.42□□□□□ -0.58
USP49-204ENST00000423567 AGO1Q9UL18 857 aaKnown RBP11.42□□□□□ -0.58
USP49-204ENST00000423567 R4GN57 208 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 PAPSS1O43252 624 aaPredicted RBP11.41□□□□□ -0.58
USP49-204ENST00000423567 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
USP49-204ENST00000423567 GFRA3O60609 400 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 CAVIN2O95810 425 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 LATS1O95835 1130 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 KLKB1P03952 638 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 STAT1P42224 750 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 TNFRSF4P43489 277 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 SLC11A2P49281 568 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 TBX4P57082 545 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 YWHAZP63104 245 aaKnown RBP11.41□□□□□ -0.58
USP49-204ENST00000423567 MRPS21P82921 87 aaKnown RBP11.41□□□□□ -0.58
USP49-204ENST00000423567 TRIP4Q15650 581 aaPredicted RBP11.41□□□□□ -0.58
USP49-204ENST00000423567 GAB4Q2WGN9 574 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 C2orf27AQ580R0 203 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 EFHC1Q5JVL4 640 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 OR6B2Q6IFH4 312 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 TOGARAM2Q6ZUX3 1019 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 BEND5Q7L4P6 421 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 C12orf40Q86WS4 652 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 ZNF677Q86XU0 584 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 DHX40Q8IX18 779 aaKnown RBP11.41□□□□□ -0.58
USP49-204ENST00000423567 ETFBKMTQ8IXQ9 262 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 CPXM2Q8N436 756 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 BHMTQ93088 406 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 DDX50Q9BQ39 737 aaKnown RBP11.41□□□□□ -0.58
USP49-204ENST00000423567 GANQ9H2C0 597 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 POPDC2Q9HBU9 364 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 NLRC4Q9NPP4 1024 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 CYTH4Q9UIA0 394 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 CACNA1HO95180 2353 aa11.41□□□□□ -0.58
USP49-204ENST00000423567 K7EQS6 105 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 CACNG3O60359 315 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 HSF2BPO75031 334 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 GFPT2O94808 682 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 LSM8O95777 96 aaKnown RBP11.4□□□□□ -0.58
USP49-204ENST00000423567 LMNAP02545 664 aaKnown RBP11.4□□□□□ -0.58
USP49-204ENST00000423567 APOEP02649 317 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 GLI1P08151 1106 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 ATP1A3P13637 1013 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 SOX5P35711 763 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 DGKGP49619 791 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 KLK7P49862 253 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 CDK17Q00537 523 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 RING1Q06587 406 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 NNTQ13423 1086 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 HSF5Q4G112 596 aaPredicted RBP11.4□□□□□ -0.58
USP49-204ENST00000423567 MPPE1Q53F39 396 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 C10orf76Q5T2E6 689 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 HEATR6Q6AI08 1181 aaKnown RBP11.4□□□□□ -0.58
USP49-204ENST00000423567 SYT13Q7L8C5 426 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 CACNA2D4Q7Z3S7 1137 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 TRMT11Q7Z4G4 463 aaKnown RBP11.4□□□□□ -0.58
USP49-204ENST00000423567 LONP2Q86WA8 852 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 ZDHHC17Q8IUH5 632 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 CAMKK1Q8N5S9 505 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 TERB1Q8NA31 727 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 ZBTB44Q8NCP5 570 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 DQX1Q8TE96 717 aaKnown RBP11.4□□□□□ -0.58
USP49-204ENST00000423567 USP33Q8TEY7 942 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 DDI1Q8WTU0 396 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 EZH1Q92800 747 aaPredicted RBP11.4□□□□□ -0.58
USP49-204ENST00000423567 ERGIC2Q96RQ1 377 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 CPXM1Q96SM3 734 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 ASNSD1Q9NWL6 643 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 PLK2Q9NYY3 685 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 NAALADL1Q9UQQ1 740 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 SIK3Q9Y2K2 1263 aa11.4□□□□□ -0.58
USP49-204ENST00000423567 A0A0A0MRY4 1105 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 TYW5A2RUC4 315 aaKnown RBP11.39□□□□□ -0.59
USP49-204ENST00000423567 PRR23AA6NEV1 266 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 GOLGA6L19H0YKK7 550 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 SERPINC1P01008 464 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 TDGF1P13385 188 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 HOXA6P31267 233 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 GBP1P32455 592 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 CNR2P34972 360 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 FNTBP49356 437 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 JAM2P57087 298 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 DMC1Q14565 340 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 DCAF6Q58WW2 860 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 EOGTQ5NDL2 527 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 ADGRF1Q5T601 910 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 SDE2Q6IQ49 451 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 PKN3Q6P5Z2 889 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 FAM183BPQ6ZVS7 135 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 NOP9Q86U38 636 aaKnown RBP11.39□□□□□ -0.59
USP49-204ENST00000423567 ERICH1Q86X53 443 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 WDTC1Q8N5D0 677 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 TSTD1Q8NFU3 115 aa11.39□□□□□ -0.59
USP49-204ENST00000423567 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms