RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PLA2G2FQ9BZM2 168 aa17.7■□□□□ 0.42
COL7A1-202ENST00000422991 CTTNBP2NLQ9P2B4 639 aa17.7■□□□□ 0.42
COL7A1-202ENST00000422991 UVRAGQ9P2Y5 699 aa17.7■□□□□ 0.42
COL7A1-202ENST00000422991 RCCD1A6NED2 376 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 CCP110O43303 1012 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 GREM1O60565 184 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 ENDOD1O94919 500 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 GBP1P32455 592 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 VAV2P52735 878 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 TBX4P57082 545 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 TCEAL1Q15170 157 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 C15orf59Q2T9L4 293 aaPredicted RBP17.69■□□□□ 0.42
COL7A1-202ENST00000422991 MFSD6LQ8IWD5 586 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 KIAA1958Q8N8K9 716 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 BPIFB1Q8TDL5 484 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 DEPDC1BQ8WUY9 529 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 RSAD2Q8WXG1 361 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
COL7A1-202ENST00000422991 FCRL2Q96LA5 508 aaPredicted RBP17.69■□□□□ 0.42
COL7A1-202ENST00000422991 CNPY3Q9BT09 278 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 RPP25Q9BUL9 199 aaKnown RBP17.69■□□□□ 0.42
COL7A1-202ENST00000422991 C1QTNF1Q9BXJ1 281 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 KCNK12Q9HB15 430 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 PIGVQ9NUD9 493 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 IGSF9Q9P2J2 1179 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 TFR2Q9UP52 801 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 ADGRG1Q9Y653 693 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 COL4A2P08572 1712 aa17.69■□□□□ 0.42
COL7A1-202ENST00000422991 COL4A3Q01955 1670 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 SYNJ2BP-COX16A0A087WUM0 186 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 E2F8A0AVK6 867 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 MTA2O94776 668 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 ASGR2P07307 311 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
COL7A1-202ENST00000422991 ATP11AP98196 1134 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 DEUP1Q05D60 604 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 FCHO2Q0JRZ9 810 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 NME3Q13232 169 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 CDO1Q16878 200 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 SH3PXD2AQ5TCZ1 1133 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 NUGGCQ68CJ6 796 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 Q6ZNB5 142 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 STRADAQ7RTN6 431 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 RHOT2Q8IXI1 618 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 TTC16Q8NEE8 873 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 SLC35G2Q8TBE7 412 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 FAM172AQ8WUF8 416 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 COX16Q9P0S2 106 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 ANAPC7Q9UJX3 599 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 LSM7Q9UK45 103 aaKnown RBP17.68■□□□□ 0.42
COL7A1-202ENST00000422991 SH3BP1Q9Y3L3 701 aa17.68■□□□□ 0.42
COL7A1-202ENST00000422991 A0A0A6YYK5 440 aaPredicted RBP17.67■□□□□ 0.42
COL7A1-202ENST00000422991 PI4K2BG5E9Z4 385 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 SCAMP3O14828 347 aaKnown RBP17.67■□□□□ 0.42
COL7A1-202ENST00000422991 PJA2O43164 708 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 F9P00740 461 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 KLKB1P03952 638 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 PSMC3P17980 439 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 PSMA2P25787 234 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 CORO1AP31146 461 aaKnown RBP17.67■□□□□ 0.42
COL7A1-202ENST00000422991 CXCR3P49682 368 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 GRM2Q14416 872 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 RAB6CQ53S08 254 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 ZC3H12AQ5D1E8 599 aaKnown RBP17.67■□□□□ 0.42
COL7A1-202ENST00000422991 HTR3DQ70Z44 454 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 KIAA1328Q86T90 577 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 DCLK3Q9C098 648 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 RAB6CQ9H0N0 254 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 EPHX3Q9H6B9 360 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 OSGEPQ9NPF4 335 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 TMEM51Q9NW97 253 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 MYO10Q9HD67 2058 aa17.67■□□□□ 0.42
COL7A1-202ENST00000422991 TICRRQ7Z2Z1 1910 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 BTNL10A8MVZ5 291 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 SLC2A3P11169 496 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 ALADP13716 330 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 CCR1P32246 355 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 HARS2P49590 506 aaKnown RBP17.66■□□□□ 0.42
COL7A1-202ENST00000422991 ATXN1P54253 815 aaKnown RBP17.66■□□□□ 0.42
COL7A1-202ENST00000422991 HDAC4P56524 1084 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 PPP2R5DQ14738 602 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 SND1Q7KZF4 910 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL7A1-202ENST00000422991 UNC45BQ8IWX7 931 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 BBS7Q8IWZ6 715 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 TXLNBQ8N3L3 684 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 SLC44A3Q8N4M1 653 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 NIPA2Q8N8Q9 360 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 ASIC4Q96FT7 647 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 BTBD6Q96KE9 485 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 ZNF830Q96NB3 372 aaPredicted RBP17.66■□□□□ 0.42
COL7A1-202ENST00000422991 LACRTQ9GZZ8 138 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL7A1-202ENST00000422991 IP6K2Q9UHH9 426 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 WNT6Q9Y6F9 365 aa17.66■□□□□ 0.42
COL7A1-202ENST00000422991 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 KCNU1A8MYU2 1149 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 MYO1FO00160 1098 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 LATS1O95835 1130 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 APOEP02649 317 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 DESP17661 470 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms