RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ARSAP15289 507 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 PDGFRAP16234 1089 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 TFE3P19532 575 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 RFC1P35251 1148 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 IFNAR2P48551 515 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 SULT1E1P49888 294 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 KPNA1P52294 538 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 GALCP54803 685 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 GSCP56915 257 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 TBX4P57082 545 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 TNK2Q07912 1038 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 NME3Q13232 169 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 MAMLD1Q13495 774 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 TRIP4Q15650 581 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 CCDC14Q49A88 953 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 ARHGAP29Q52LW3 1261 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 PPP1R15BQ5SWA1 713 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 HTR3DQ70Z44 454 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 ARCQ7LC44 396 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 DENND1CQ8IV53 801 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 BBS7Q8IWZ6 715 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 TTC8Q8TAM2 541 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 OSCP1Q8WVF1 389 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 IRF7Q92985 503 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 ZNF653Q96CK0 615 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 CFAP57Q96MR6 1250 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 SERPINB11Q96P15 392 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 NPY6RQ99463 290 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 FAM83CQ9BQN1 747 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 DDX23Q9BUQ8 820 aaKnown RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 THAP2Q9H0W7 228 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 KCNH6Q9H252 994 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 EBF3Q9H4W6 596 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 FAM204AQ9H8W3 233 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 PARVAQ9NVD7 372 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 DDIT4Q9NX09 232 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 CALCOCO1Q9P1Z2 691 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 MYO1AQ9UBC5 1043 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 CNOT8Q9UFF9 292 aaKnown RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 LSM7Q9UK45 103 aaKnown RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 STAP1Q9ULZ2 295 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 DUSP12Q9UNI6 340 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 OTOL1A6NHN0 477 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 SOWAHDA6NJG2 315 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ARNTLO00327 626 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 SLC9A3R1O14745 358 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 IRAK2O43187 625 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 IGLV3-27P01718 113 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ALADP13716 330 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 FECHP22830 423 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 CORO1AP31146 461 aaKnown RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 GBP1P32455 592 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 HARS2P49590 506 aaKnown RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ATXN1P54253 815 aaKnown RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 RPL7AP62424 266 aaKnown RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ZXDAP98168 799 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ATP11AP98196 1134 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 EIF4EBP2Q13542 120 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 PDGFRLQ15198 375 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 C15orf59Q2T9L4 293 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 EML3Q32P44 896 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 SLC25A52Q3SY17 297 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ZC3H12AQ5D1E8 599 aaKnown RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 SH3PXD2AQ5TCZ1 1133 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 OTUD1Q5VV17 481 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 PLEKHA7Q6IQ23 1121 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 DCUN1D2Q6PH85 259 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 Q6ZNB5 142 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 TMTC1Q8IUR5 882 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 UBALD2Q8IYN6 164 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ADGRG2Q8IZP9 1017 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 KIAA1958Q8N8K9 716 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 RNF34Q969K3 372 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 NT5C3BQ969T7 300 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 PLD4Q96BZ4 506 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ARHGEF26Q96DR7 871 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 TRIM11Q96F44 468 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 SLC39A13Q96H72 371 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 FCRL2Q96LA5 508 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 MCEEQ96PE7 176 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 TBCBQ99426 244 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 BAG1Q99933 345 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 PACSIN1Q9BY11 444 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 ADAM33Q9BZ11 813 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 DCLK3Q9C098 648 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 HPS4Q9NQG7 708 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 SLC2A4RGQ9NR83 387 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 RRN3Q9NYV6 651 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 TBC1D14Q9P2M4 693 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 AGO1Q9UL18 857 aaKnown RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 TLR6Q9Y2C9 796 aa9.65□□□□□ -0.86
PDGFC-202ENST00000422544 EPN1Q9Y6I3 576 aaPredicted RBP9.65□□□□□ -0.86
PDGFC-202ENST00000422544 SPTBN2O15020 2390 aa9.65□□□□□ -0.87
PDGFC-202ENST00000422544 ANAPC1Q9H1A4 1944 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 ANKRD62A6NC57 917 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 TMEM191CA6NGB0 347 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 CYP1A2P05177 515 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms