RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 RASAL2Q9UJF2 1139 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 RCOR1Q9UKL0 485 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 CFAP45Q9UL16 551 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 CKAP5Q14008 2032 aa17.7■□□□□ 0.42
UPF3AP3-201ENST00000420996 PLXNB3Q9ULL4 1909 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 KCNJ18B7U540 433 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 CYBBP04839 570 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 MYL1P05976 194 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 CD58P19256 250 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 GCLMP48507 274 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 PPP3CAQ08209 521 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 EFEMP1Q12805 493 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 ZNF234Q14588 700 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 NFIL3Q16649 462 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 INTS8Q75QN2 995 aaKnown RBP17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 ANKS1BQ7Z6G8 1248 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 GLRX5Q86SX6 157 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 TMPRSS6Q8IU80 811 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 TAS1R2Q8TE23 839 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 PRCCQ92733 491 aaPredicted RBP17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 NUP58Q9BVL2 599 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 SLC2A11Q9BYW1 496 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 ELOVL2Q9NXB9 296 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 USP25Q9UHP3 1055 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 AGO1Q9UL18 857 aaKnown RBP17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 APOBEC2Q9Y235 224 aaKnown RBP17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 DMXL2Q8TDJ6 3036 aa17.69■□□□□ 0.42
UPF3AP3-201ENST00000420996 WDFY3Q8IZQ1 3526 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 METTL12A8MUP2 240 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 CBFA2T3O75081 653 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 IGLV3-19P01714 112 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 HMBSP08397 361 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 ZNF883P0CG24 379 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 ENPEPQ07075 957 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 SCAPQ12770 1279 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 EIF4HQ15056 248 aaKnown RBP17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 DCAF12L1Q5VU92 463 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 CPXM2Q8N436 756 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 ZCCHC9Q8N567 271 aaKnown RBP17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 PNPLA1Q8N8W4 532 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 CCDC150Q8NCX0 1101 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 MIR1-1HGQ9H1L0 117 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 MARCH2Q9P0N8 246 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 PCOLCE2Q9UKZ9 415 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 STRIP2Q9ULQ0 834 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 ADAMTS20P59510 1910 aa17.68■□□□□ 0.42
UPF3AP3-201ENST00000420996 ATRXP46100 2492 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 BAHCC1Q9P281 2608 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 BCAT2O15382 392 aaPredicted RBP17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 TIMM44O43615 452 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 ACADMP11310 421 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 KRT13P13646 458 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 NR2F2P24468 414 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 COPAP53621 1224 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 ZNF394Q53GI3 561 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 CCNI2Q6ZMN8 369 aaPredicted RBP17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 DENND1CQ8IV53 801 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 TTC39CQ8N584 583 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 RBBP8NLQ8NC74 664 aaPredicted RBP17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 SPRYD3Q8NCJ5 442 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 SNX21Q969T3 373 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 FAXDC2Q96IV6 333 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 HEXIM2Q96MH2 286 aaKnown RBP17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 GAREM1Q9H706 876 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 KIAA1522Q9P206 1035 aaPredicted RBP17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 PTPRBP23467 1997 aa17.67■□□□□ 0.42
UPF3AP3-201ENST00000420996 ZFYVE26Q68DK2 2539 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 CER1O95813 267 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 PRKCHP24723 683 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 PSMC2P35998 433 aaKnown RBP17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 MATKP42679 507 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 RAB41Q5JT25 222 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 IL27RAQ6UWB1 636 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 RSRC2Q7L4I2 434 aaKnown RBP17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 SLCO6A1Q86UG4 719 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 FAM217AQ8IXS0 508 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 FAM186BQ8IYM0 893 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 SETD7Q8WTS6 366 aaKnown RBP17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 DDI1Q8WTU0 396 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 CIPCQ9C0C6 399 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 PCED1AQ9H1Q7 454 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 IL21RQ9HBE5 538 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 TMEM8AQ9HCN3 771 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 CLEC4EQ9ULY5 219 aa17.66■□□□□ 0.42
UPF3AP3-201ENST00000420996 A0A1B0GVL5 298 aa17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 SLC12A8A0AV02 714 aa17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 RHOBTB3O94955 611 aa17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 EPHX1P07099 455 aa17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 PFKFB1P16118 471 aa17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 CMA1P23946 247 aa17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 RPL13P26373 211 aaKnown RBP17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 GTF2H1P32780 548 aa17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 MCCD1P59942 119 aaPredicted RBP17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 YWHAGP61981 247 aaKnown RBP eCLIP17.65■□□□□ 0.42
UPF3AP3-201ENST00000420996 BNC1Q01954 994 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms