RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SMRP1Q8NCR6 262 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 CD101Q93033 1021 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 FCRL2Q96LA5 508 aaPredicted RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 ZSWIM3Q96MP5 696 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 PEBP4Q96S96 227 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 WDCPQ9H6R7 721 aa12.99□□□□□ -0.33
TMEM53-206ENST00000420706 UBE2ZQ9H832 354 aaPredicted RBP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM53-206ENST00000420706 KCNU1A8MYU2 1149 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 ESPNB1AK53 854 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 H3BQ06 376 aaPredicted RBP12.98□□□□□ -0.33
TMEM53-206ENST00000420706 PRPSAP2O60256 369 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 IGLV3-27P01718 113 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 HMBSP08397 361 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 CTNNA2P26232 953 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 WEE1P30291 646 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 KCNQ1P51787 676 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 ETF1P62495 437 aaKnown RBP12.98□□□□□ -0.33
TMEM53-206ENST00000420706 ZXDBP98169 803 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 RING1Q06587 406 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 PPP2R5DQ14738 602 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
TMEM53-206ENST00000420706 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 BOLA3Q53S33 107 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 BRMS1LQ5PSV4 323 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 TXNRD3NBQ6F5E7 133 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 CYP4V2Q6ZWL3 525 aaPredicted RBP12.98□□□□□ -0.33
TMEM53-206ENST00000420706 RHOT1Q8IXI2 618 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 CCDC185Q8N715 623 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 SUSD6Q92537 303 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 FGF13Q92913 245 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 RNF34Q969K3 372 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 WBP2Q969T9 261 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 HES6Q96HZ4 224 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 ZFRQ96KR1 1074 aaKnown RBP12.98□□□□□ -0.33
TMEM53-206ENST00000420706 WDR24Q96S15 920 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 ANLNQ9NQW6 1124 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 ARHGEF38Q9NXL2 777 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 PACSIN2Q9UNF0 486 aaPredicted RBP12.98□□□□□ -0.33
TMEM53-206ENST00000420706 PCDHA3Q9Y5H8 950 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 CPQQ9Y646 472 aa12.98□□□□□ -0.33
TMEM53-206ENST00000420706 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 I6L893 689 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 PSTPIP1O43586 416 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 STC2O76061 302 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 TUBB4AP04350 444 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 CKMP06732 381 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 RARAP10276 462 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 SLC2A3P11169 496 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 TNNT1P13805 278 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 KCNA5P22460 613 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 CCR1P32246 355 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 ADRA1BP35368 520 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 AVPR1AP37288 418 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 PEX5P50542 639 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 LRRC38Q5VT99 294 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 GET4Q7L5D6 327 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 ARID3BQ8IVW6 561 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 UNC45BQ8IWX7 931 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 MAFAQ8NHW3 353 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 ADAMTS19Q8TE59 1207 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 KRT35Q92764 455 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 USP13Q92995 863 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 HLA-CQ95604 372 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 NTAN1Q96AB6 310 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 PLD4Q96BZ4 506 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 C16orf45Q96MC5 204 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 NECTIN4Q96NY8 510 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 TLR10Q9BXR5 811 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 MAGEB5Q9BZ81 275 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 TKTL2Q9H0I9 626 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 SMG9Q9H0W8 520 aaKnown RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 POMKQ9H5K3 350 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 SLITRK6Q9H5Y7 841 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 ZWILCHQ9H900 591 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 TMPRSS4Q9NRS4 437 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 SMPD4Q9NXE4 827 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 FZD10Q9ULW2 581 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 ARHGAP26Q9UNA1 814 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 JRKLQ9Y4A0 524 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 USP15Q9Y4E8 981 aaPredicted RBP12.97□□□□□ -0.33
TMEM53-206ENST00000420706 SZT2Q5T011 3432 aa12.97□□□□□ -0.33
TMEM53-206ENST00000420706 CCDC66A2RUB6 948 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 MIF4GDA9UHW6 222 aaKnown RBP12.96□□□□□ -0.33
TMEM53-206ENST00000420706 LEFTY2O00292 366 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 ENC1O14682 589 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 FANCGO15287 622 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 MBTPS2O43462 519 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 ZNF500O60304 480 aaPredicted RBP12.96□□□□□ -0.33
TMEM53-206ENST00000420706 GREM1O60565 184 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 KRT7P08729 469 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 TCF3P15923 654 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.33
TMEM53-206ENST00000420706 AIF1P55008 147 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms