RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 BMP8BP34820 402 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 GPR15P49685 360 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 CENPCQ03188 943 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 AUHQ13825 339 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 TCEAL1Q15170 157 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 RBBP5Q15291 538 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 RNF43Q68DV7 783 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SPATA31D4Q6ZUB0 917 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SPATA2LQ8IUW3 424 aaPredicted RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 KIRREL3Q8IZU9 778 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 GDPD5Q8WTR4 605 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 DYDC1Q8WWB3 177 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 PIWIL1Q96J94 861 aaKnown RBP13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SERPINB12Q96P63 405 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 HERC2P3Q9BVR0 1158 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 SLC28A3Q9HAS3 691 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 KIAA1257Q9ULG3 409 aa13.39□□□□□ -0.27
LINC00642-201ENST00000419459 F8VP50 259 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 RFXAPO00287 272 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 TEX28O15482 410 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 GABBR2O75899 941 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 KRT16P08779 473 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 CNPP09543 421 aaKnown RBP13.38□□□□□ -0.27
LINC00642-201ENST00000419459 CTSAP10619 480 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 NPR3P17342 541 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 PTGIRP43119 386 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 BCAT1P54687 386 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 RWDD2BP57060 319 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 DUSP4Q13115 394 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 PARP6Q2NL67 630 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 DCAF12L1Q5VU92 463 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 GPRIN1Q7Z2K8 1008 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 SPATA21Q7Z572 469 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 ANKRD52Q8NB46 1076 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 ZMIZ2Q8NF64 920 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 SLC35G2Q8TBE7 412 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 SPATA18Q8TC71 538 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 SLC35F5Q8WV83 523 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 ARHGEF26Q96DR7 871 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 SMOQ99835 787 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 TLR9Q9NR96 1032 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 PRKAG3Q9UGI9 489 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
LINC00642-201ENST00000419459 COL4A4P53420 1690 aaPredicted RBP13.38□□□□□ -0.27
LINC00642-201ENST00000419459 DOCK6Q96HP0 2047 aa13.38□□□□□ -0.27
LINC00642-201ENST00000419459 MTMR11A4FU01 709 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 E5RJQ4 531 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 C5orf67F2Z3F1 127 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 H7C4K7 107 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 ERBB2P04626 1255 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 FAM200BP0CF97 657 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 PPARDQ03181 441 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 BST2Q10589 180 aaKnown RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 IFRD2Q12894 506 aaPredicted RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 DDR2Q16832 855 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 ACAD10Q6JQN1 1059 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 C11orf63Q6NUN7 778 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 MON1BQ7L1V2 547 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 RHOT2Q8IXI1 618 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 SMARCD1Q96GM5 515 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 SEPT5Q99719 369 aaPredicted RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 C11orf84Q9BUA3 381 aaPredicted RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 DUSP16Q9BY84 665 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 LHX5Q9H2C1 402 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 TXLNGQ9NUQ3 528 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 ADAM22Q9P0K1 906 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 ZFATQ9P243 1243 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 MYO16Q9Y6X6 1858 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 OR6C75A6NL08 312 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 CXCL14O95715 111 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 GZMAP12544 262 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 RRM1P23921 792 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 CTNNA2P26232 953 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 CDH5P33151 784 aaPredicted RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 GRIK1P39086 918 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 ERVK-21P61565 698 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 MRPS35P82673 323 aaKnown RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 GPR17Q13304 367 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 STILQ15468 1287 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 MGAT5BQ3V5L5 792 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 SCN4BQ8IWT1 228 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 SCUBE3Q8IX30 993 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 UBL4BQ8N7F7 174 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 FBF1Q8TES7 1133 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 CLEC4CQ8WTT0 213 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 CKAP2Q8WWK9 683 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 NDRG1Q92597 394 aaKnown RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 NAF1Q96HR8 494 aaKnown RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 MIS12Q9H081 205 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 SYNCQ9H7C4 482 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms