RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 IFI35P80217 286 aaPredicted RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 GBE1Q04446 702 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 DEUP1Q05D60 604 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 PDIA2Q13087 525 aaKnown RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 NR1H3Q13133 447 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 BFSP2Q13515 415 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 GPNMBQ14956 572 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 MSS51Q4VC12 460 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 PLEKHG4Q58EX7 1191 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 PPP6R3Q5H9R7 873 aaPredicted RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 FNBP1LQ5T0N5 605 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 C4orf50Q6ZRC1 276 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 LRRTM3Q86VH5 581 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 EXOC3L1Q86VI1 746 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ZC3H18Q86VM9 953 aaKnown RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 PDIK1LQ8N165 341 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 UHMK1Q8TAS1 419 aaKnown RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ZNF296Q8WUU4 475 aaPredicted RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ATXN2LQ8WWM7 1075 aaKnown RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 MAML1Q92585 1016 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 APBB2Q92870 758 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 FUBP3Q96I24 572 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 KCNK16Q96T55 309 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 DHRS4Q9BTZ2 278 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ZCWPW1Q9H0M4 648 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 C10orf88Q9H8K7 445 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 PAK6Q9NQU5 681 aaPredicted RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ETNK2Q9NVF9 386 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 FBXW11Q9UKB1 542 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 NAALADL1Q9UQQ1 740 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 HTTP42858 3142 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 COL4A6Q14031 1691 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ATXN2Q99700 1313 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 NYNRINQ9P2P1 1898 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 I6L893 689 aaPredicted RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 MFSD11O43934 449 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 NBNO60934 754 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM107AO95990 144 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 USP17L7P0C7H9 530 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 AMPD1P23109 780 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 BDNFP23560 247 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 YY1P25490 414 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 CYP2C18P33260 490 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 HTR7P34969 479 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 PHBP35232 272 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 SLCO1A2P46721 670 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 GLUD2P49448 558 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 SLC18A1P54219 525 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 HNRNPH2P55795 449 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 CDK16Q00536 496 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 YWHAHQ04917 246 aaPredicted RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 GAD2Q05329 585 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 SEMA5AQ13591 1074 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 MRPL58Q14197 206 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 CCDC38Q502W7 563 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 KCNT2Q6UVM3 1135 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 VSTM1Q6UX27 236 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 TADA2BQ86TJ2 420 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 ZNF280BQ86YH2 543 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 CCDC13Q8IYE1 715 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 ZBED8Q8IZ13 594 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 CRIPAKQ8N1N5 446 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 PYROXD2Q8N2H3 581 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 ARHGEF2Q92974 986 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 LRRC39Q96DD0 335 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 XPO6Q96QU8 1125 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 TMEM209Q96SK2 561 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 RHOBTB2Q9BYZ6 727 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 MAGEB5Q9BZ81 275 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 KLC2Q9H0B6 622 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 BRD8Q9H0E9 1235 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 ACSS3Q9H6R3 686 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 EIF2B3Q9NR50 452 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 IL37Q9NZH6 218 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 SENP1Q9P0U3 644 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 XPO7Q9UIA9 1087 aaKnown RBP9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 GGA2Q9UJY4 613 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 PRDM4Q9UKN5 801 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 HEY1Q9Y5J3 304 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 TEX264Q9Y6I9 313 aa9.37□□□□□ -0.91
LINCMD1-201ENST00000418518 A0A0A0MRY4 1105 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 EXOC1LA0A1B0GW35 172 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 SMIM23A6NLE4 172 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 F8W810 466 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 EEF2KO00418 725 aaKnown RBP9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 ENPP3O14638 875 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 CAPN9O14815 690 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 IRAK2O43187 625 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 OPHN1O60890 802 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM155BO75949 473 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 C1QAP02745 245 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 CXCL10P02778 98 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 GSTA2P09210 222 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 VAV1P15498 845 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 CHN1P15882 459 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 HOXC13P31276 330 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 FDFT1P37268 417 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 MAGEA11P43364 429 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 NRLP54845 237 aa9.36□□□□□ -0.91
LINCMD1-201ENST00000418518 BASP1P80723 227 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms