RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 USP39Q53GS9 565 aaKnown RBP16.3■□□□□ 0.2
ITGB1-204ENST00000417122 TCP11X2Q5H9J9 407 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 EGFLAMQ63HQ2 1017 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 ENOX1Q8TC92 643 aaKnown RBP16.3■□□□□ 0.2
ITGB1-204ENST00000417122 DDI1Q8WTU0 396 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 FAM149B1Q96BN6 582 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 ZC3H10Q96K80 434 aaKnown RBP16.3■□□□□ 0.2
ITGB1-204ENST00000417122 CYTH4Q9UIA0 394 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 SLC27A6Q9Y2P4 619 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 CFAP54Q96N23 3096 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 TCRBV21S2A2A0A5A6 115 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 E5RJQ4 531 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 FOXN3O00409 490 aaPredicted RBP16.29■□□□□ 0.2
ITGB1-204ENST00000417122 DCLK1O15075 740 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 IGLV3-27P01718 113 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 FYNP06241 537 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 NTSR1P30989 418 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 WASP42768 502 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 PTK2Q05397 1052 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 PDCLQ13371 301 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 PLK5Q496M5 336 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 MPPE1Q53F39 396 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 SDE2Q6IQ49 451 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 SASS6Q6UVJ0 657 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 TMEM110Q86TL2 294 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 CHPFQ8IZ52 775 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 LOXL4Q96JB6 756 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 SEMA4GQ9NTN9 838 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 BCCIPQ9P287 314 aaKnown RBP eCLIP16.29■□□□□ 0.2
ITGB1-204ENST00000417122 STOML2Q9UJZ1 356 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 PCDHGC3Q9UN70 934 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 NAALADL1Q9UQQ1 740 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 INVSQ9Y283 1065 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 SPAG17Q6Q759 2223 aa16.29■□□□□ 0.2
ITGB1-204ENST00000417122 PAPSS1O43252 624 aaPredicted RBP16.28■□□□□ 0.2
ITGB1-204ENST00000417122 TSPAN3O60637 253 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 EPN2O95208 641 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 HOXB2P14652 356 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 CLCN1P35523 988 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 TBX4P57082 545 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 ZNF445P59923 1031 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 ADGRF1Q5T601 910 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 NUGGCQ68CJ6 796 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 PASD1Q8IV76 773 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 UNC45BQ8IWX7 931 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 PGBD3Q8N328 593 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 DQX1Q8TE96 717 aaKnown RBP16.28■□□□□ 0.2
ITGB1-204ENST00000417122 HMGB4Q8WW32 186 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 RMDN1Q96DB5 314 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 ACOX2Q99424 681 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 TRIM62Q9BVG3 475 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 SLC2A11Q9BYW1 496 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 DUSP15Q9H1R2 295 aaPredicted RBP16.28■□□□□ 0.2
ITGB1-204ENST00000417122 ARRDC1-AS1Q9H2J1 176 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 TAB2Q9NYJ8 693 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 CLEC4EQ9ULY5 219 aa16.28■□□□□ 0.2
ITGB1-204ENST00000417122 CAPN9O14815 690 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 RHOBTB1O94844 696 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 MBD3O95983 291 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.2
ITGB1-204ENST00000417122 GBP1P32455 592 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 LMNB2Q03252 620 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 RING1Q06587 406 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 RAPGEF1Q13905 1077 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 ELF2Q15723 593 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 CSRP2Q16527 193 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 GEN1Q17RS7 908 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 KLHDC7AQ5VTJ3 777 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 BEND5Q7L4P6 421 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 ANKS1BQ7Z6G8 1248 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 C11orf74Q86VG3 221 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 SLC47A2Q86VL8 602 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 WDTC1Q8N5D0 677 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 OLIG1Q8TAK6 271 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 TMA16Q96EY4 203 aaKnown RBP16.27■□□□□ 0.2
ITGB1-204ENST00000417122 PIWIL1Q96J94 861 aaKnown RBP16.27■□□□□ 0.2
ITGB1-204ENST00000417122 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 SERPINB11Q96P15 392 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 GABRG3Q99928 467 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 LHX5Q9H2C1 402 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 POPDC2Q9HBU9 364 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 ANO10Q9NW15 660 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 FHOD1Q9Y613 1164 aa16.27■□□□□ 0.2
ITGB1-204ENST00000417122 EP300Q09472 2414 aaPredicted RBP16.27■□□□□ 0.19
ITGB1-204ENST00000417122 GPR179Q6PRD1 2367 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 A0A1W2PQF6 199 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 GFRA2O00451 464 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 ACSL4O60488 711 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 HOXD9P28356 352 aaPredicted RBP16.26■□□□□ 0.19
ITGB1-204ENST00000417122 KRT9P35527 623 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 SLC11A2P49281 568 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 BPIFB4P59827 614 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 ARHGAP8P85298 464 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 NNTQ13423 1086 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
ITGB1-204ENST00000417122 RSPO4Q2I0M5 234 aaPredicted RBP16.26■□□□□ 0.19
ITGB1-204ENST00000417122 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
ITGB1-204ENST00000417122 SYPL2Q5VXT5 272 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms