RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 PIWIL1Q96J94 861 aaKnown RBP18.69■□□□□ 0.58
CPNE1-210ENST00000416778 HSFY1Q96LI6 401 aa18.69■□□□□ 0.58
CPNE1-210ENST00000416778 GABRG3Q99928 467 aa18.69■□□□□ 0.58
CPNE1-210ENST00000416778 INTS2Q9H0H0 1204 aaKnown RBP18.69■□□□□ 0.58
CPNE1-210ENST00000416778 UBE2TQ9NPD8 197 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-210ENST00000416778 HBS1LQ9Y450 684 aaKnown RBP18.69■□□□□ 0.58
CPNE1-210ENST00000416778 LAMA1P25391 3075 aa18.69■□□□□ 0.58
CPNE1-210ENST00000416778 RALGAPA1Q6GYQ0 2036 aa18.69■□□□□ 0.58
CPNE1-210ENST00000416778 WASH3PC4AMC7 463 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 GFRA2O00451 464 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 GPD2P43304 727 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 RPL34P49207 117 aaKnown RBP18.68■□□□□ 0.58
CPNE1-210ENST00000416778 MFAP3P55082 362 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 BYSLQ13895 437 aaKnown RBP18.68■□□□□ 0.58
CPNE1-210ENST00000416778 AASDHQ4L235 1098 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-210ENST00000416778 SDE2Q6IQ49 451 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 KIAA1211LQ6NV74 962 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 CHPFQ8IZ52 775 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 PGBD3Q8N328 593 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 IRGQQ8WZA9 623 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 BCCIPQ9P287 314 aaKnown RBP eCLIP18.68■□□□□ 0.585e-7■■■□□ 17.8
CPNE1-210ENST00000416778 STOML2Q9UJZ1 356 aa18.68■□□□□ 0.58
CPNE1-210ENST00000416778 PIK3R2O00459 728 aa18.67■□□□□ 0.58
CPNE1-210ENST00000416778 MAP3K13O43283 966 aa18.67■□□□□ 0.58
CPNE1-210ENST00000416778 HOXB2P14652 356 aa18.67■□□□□ 0.58
CPNE1-210ENST00000416778 HARS2P49590 506 aaKnown RBP18.67■□□□□ 0.58
CPNE1-210ENST00000416778 GEN1Q17RS7 908 aa18.67■□□□□ 0.58
CPNE1-210ENST00000416778 SCUBE3Q8IX30 993 aa18.67■□□□□ 0.58
CPNE1-210ENST00000416778 IPO4Q8TEX9 1081 aaKnown RBP18.67■□□□□ 0.58
CPNE1-210ENST00000416778 SLC2A11Q9BYW1 496 aa18.67■□□□□ 0.58
CPNE1-210ENST00000416778 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 M0QYV0 167 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 FYNP06241 537 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 SPDYCQ5MJ68 293 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 STPG1Q5TH74 334 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 TCEAL6Q6IPX3 200 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 MSANTD2Q6P1R3 559 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 LPCAT2Q7L5N7 544 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 TMEFF1Q8IYR6 380 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 MLKLQ8NB16 471 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 CLEC4CQ8WTT0 213 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 DDI1Q8WTU0 396 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 TCEAL3Q969E4 200 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 CACNA2D2Q9NY47 1150 aa18.66■□□□□ 0.58
CPNE1-210ENST00000416778 THAP10Q9P2Z0 257 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-210ENST00000416778 TIMM44O43615 452 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 FBXO21O94952 628 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 CYBBP04839 570 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 SLC9A1P19634 815 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 PTGER3P43115 390 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 DHPSP49366 369 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-210ENST00000416778 ENPP2Q13822 863 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 MPPE1Q53F39 396 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 ADGRF1Q5T601 910 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 TMEM215Q68D42 235 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 DENND1BQ6P3S1 775 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 ZNF606Q8WXB4 792 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 TMA16Q96EY4 203 aaKnown RBP18.65■□□□□ 0.58
CPNE1-210ENST00000416778 ELOVL2Q9NXB9 296 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 RAD54BQ9Y620 910 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 STON1Q9Y6Q2 735 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 GON4LQ3T8J9 2241 aa18.65■□□□□ 0.58
CPNE1-210ENST00000416778 NPC1O15118 1278 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 MSI1O43347 362 aaKnown RBP18.64■□□□□ 0.57
CPNE1-210ENST00000416778 TSPAN3O60637 253 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 IGLV3-27P01718 113 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 LTFP02788 710 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 KRT5P13647 590 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 GJB7Q6PEY0 223 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 TRIM65Q6PJ69 517 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 ENOSF1Q7L5Y1 443 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 STK32AQ8WU08 396 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 PIGKQ92643 395 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 AZIN2Q96A70 460 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 ERLEC1Q96DZ1 483 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 SPACA7Q96KW9 195 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 SLC4A5Q9BY07 1137 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 MIS12Q9H081 205 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 ACP6Q9NPH0 428 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 TMEM74BQ9NUR3 256 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 CALCOCO1Q9P1Z2 691 aa18.64■□□□□ 0.57
CPNE1-210ENST00000416778 CNOT1A5YKK6 2376 aaKnown RBP18.63■□□□□ 0.57
CPNE1-210ENST00000416778 PATE3B3GLJ2 98 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 KHNYNO15037 678 aaKnown RBP18.63■□□□□ 0.57
CPNE1-210ENST00000416778 ZBTB24O43167 697 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-210ENST00000416778 LATS1O95835 1130 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 NDUFV2P19404 249 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 HOXD9P28356 352 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-210ENST00000416778 IRX4P78413 519 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 APBA1Q02410 837 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 IL31Q6EBC2 164 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 CYP2U1Q7Z449 544 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 TMEM110Q86TL2 294 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 MRGPRX1Q96LB2 322 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 CLSTN2Q9H4D0 955 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 CYTH4Q9UIA0 394 aa18.63■□□□□ 0.57
CPNE1-210ENST00000416778 IGHV1OR15-9A0A0B4J2B8 117 aa18.62■□□□□ 0.57
CPNE1-210ENST00000416778 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms