RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 PAIP1Q9H074 479 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 GPBP1L1Q9HC44 474 aaPredicted RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
SCN1B-202ENST00000415950 ZC3H4Q9UPT8 1303 aaKnown RBP13.25□□□□□ -0.29
SCN1B-202ENST00000415950 LZTS3O60299 673 aaPredicted RBP13.24□□□□□ -0.29
SCN1B-202ENST00000415950 ENTPD3O75355 529 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 AMPD1P23109 780 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 PSMA4P25789 261 aaKnown RBP13.24□□□□□ -0.29
SCN1B-202ENST00000415950 WDR4P57081 412 aaKnown RBP13.24□□□□□ -0.29
SCN1B-202ENST00000415950 RAD51Q06609 339 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 AASDHQ4L235 1098 aaPredicted RBP13.24□□□□□ -0.29
SCN1B-202ENST00000415950 PIGWQ7Z7B1 504 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 HORMAD1Q86X24 394 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 ADAM32Q8TC27 787 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 FAM151AQ8WW52 585 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 AGO4Q9HCK5 861 aaKnown RBP13.24□□□□□ -0.29
SCN1B-202ENST00000415950 ETAA1Q9NY74 926 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 BTNL10A8MVZ5 291 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 STRNO43815 780 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 GLRA3O75311 464 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 SERPINI2O75830 405 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 ZBTB7AO95365 584 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 HMGCRP04035 888 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 ICAM1P05362 532 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 ERVK-10P10266 1014 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 MGAT1P26572 445 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 POU1F1P28069 291 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 GTF2A2P52657 109 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 MAPK11Q15759 364 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 AGKQ53H12 422 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 ZRANB3Q5FWF4 1079 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 STKLD1Q8NE28 680 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 GLMNQ92990 594 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 TMEM79Q9BSE2 394 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 TCF7L2Q9NQB0 619 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 IMPAD1Q9NX62 359 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 PGK2P07205 417 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 FGRP09769 529 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 DGKDQ16760 1214 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 TFB1MQ8WVM0 346 aaKnown RBP13.24□□□□□ -0.29
SCN1B-202ENST00000415950 MTERF3Q96E29 417 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 SEPHS2Q99611 448 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 SAR1AQ9NR31 198 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 CCDC167Q9P0B6 97 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 NCANO14594 1321 aa13.24□□□□□ -0.29
SCN1B-202ENST00000415950 SDR42E2A6NKP2 422 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 EVPLLA8MZ36 301 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 PRR23D1E9PI22 279 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 OGTO15294 1046 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 FKBP6O75344 327 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 PRR23D2P0DMB1 279 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 TCF7P36402 384 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 FBXW4P57775 412 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 C1QBPQ07021 282 aaKnown RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 USP4Q13107 963 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 SEL1L3Q68CR1 1132 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 PLEKHA8Q96JA3 519 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 AGRPO00253 132 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 JCHAINP01591 159 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ANPEPP15144 967 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ATP6V1B2P21281 511 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 GARTP22102 1010 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 PTGIRP43119 386 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ROR2Q01974 943 aaKnown RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 GCNT1Q02742 428 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 PTPN11Q06124 597 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 STILQ15468 1287 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 PKN3Q6P5Z2 889 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ZNF317Q96PQ6 595 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 SLITRK1Q96PX8 696 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 TMX2Q9Y320 296 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ANKRD12Q6UB98 2062 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 RNF103O00237 685 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ENDOD1O94919 500 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 CYP1A2P05177 515 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 NUP107P57740 925 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 NAPEPLDQ6IQ20 393 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 RBM15BQ8NDT2 890 aaKnown RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 OTUB1Q96FW1 271 aaPredicted RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 LRMDAQ9H2I8 198 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ZDHHC18Q9NUE0 388 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 SPASTQ9UBP0 616 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 UBR1Q8IWV7 1749 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 C1orf232A0A0U1RR37 186 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 NR5A2O00482 541 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 HNRNPRO43390 633 aaKnown RBP13.23□□□□□ -0.29
SCN1B-202ENST00000415950 GSSP48637 474 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 NAGLUP54802 743 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 LPCAT2Q7L5N7 544 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 ABHD8Q96I13 439 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 CPB2Q96IY4 423 aa13.23□□□□□ -0.29
SCN1B-202ENST00000415950 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms