RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 CNOT8Q9UFF9 292 aaKnown RBP12.41□□□□□ -0.42
ATG4B-207ENST00000415107 SFMBT1Q9UHJ3 866 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 MUTYHQ9UIF7 546 aa12.41□□□□□ -0.42
ATG4B-207ENST00000415107 TMEM191CA6NGB0 347 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 TMCO5BA8MYB1 307 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 KCNU1A8MYU2 1149 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 EIF3CLB5ME19 914 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 PI4K2BG5E9Z4 385 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 GOLGA8SH3BPF8 625 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 MSI1O43347 362 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 GRAP2O75791 330 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 NFATC1O95644 943 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 KLKB1P03952 638 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 H2AFZP0C0S5 128 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 GPD1P21695 349 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 CCR1P32246 355 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 RFC1P35251 1148 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 CHKAP35790 457 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 EIF2DP41214 584 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 HARS2P49590 506 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 CXCR3P49682 368 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 GALCP54803 685 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 AIF1P55008 147 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 TBX4P57082 545 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 GPC5P78333 572 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 ZXDAP98168 799 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 PRKCQQ04759 706 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 SIGLEC14Q08ET2 396 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 GRM2Q14416 872 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 ACAP1Q15027 740 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 H2AFVQ71UI9 128 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 JOSD2Q8TAC2 188 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 RXFP2Q8WXD0 754 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 EDAQ92838 391 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 BTN2A3PQ96KV6 586 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 MCEEQ96PE7 176 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 EIF3CQ99613 913 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 BAG1Q99933 345 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 NCAPGQ9BPX3 1015 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 C8orf33Q9H7E9 229 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 LUC7LQ9NQ29 371 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 HPS4Q9NQG7 708 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 DDIT4Q9NX09 232 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 DUS2Q9NX74 493 aaKnown RBP12.4□□□□□ -0.42
ATG4B-207ENST00000415107 ARHGEF38Q9NXL2 777 aa12.4□□□□□ -0.42
ATG4B-207ENST00000415107 A0A0C4DFX4 3053 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 M0QYT0 321 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 HOXC11O43248 304 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 NARSO43776 548 aaKnown RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 MTA2O94776 668 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 NDUFA10O95299 355 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 APOEP02649 317 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 PDGFRAP16234 1089 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 DESP17661 470 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 IFNAR2P48551 515 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 SULT1E1P49888 294 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 RPL7AP62424 266 aaKnown RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 PITX1P78337 314 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 RUNX3Q13761 415 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 CCDC14Q49A88 953 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 DCUN1D2Q6PH85 259 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 BBS7Q8IWZ6 715 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 EMC1Q8N766 993 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 NIPA2Q8N8Q9 360 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 SPC24Q8NBT2 197 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 CTNNBL1Q8WYA6 563 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 WBP2Q969T9 261 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 TBCBQ99426 244 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 CNPY3Q9BT09 278 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 COL25A1Q9BXS0 654 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 THAP2Q9H0W7 228 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 ECT2Q9H8V3 914 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 FAM204AQ9H8W3 233 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 PIGVQ9NUD9 493 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 CALCOCO1Q9P1Z2 691 aa12.39□□□□□ -0.43
ATG4B-207ENST00000415107 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 EPN1Q9Y6I3 576 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-207ENST00000415107 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 ACSL4O60488 711 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 ADH1CP00326 375 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 CYP17A1P05093 508 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 SLC11A2P49281 568 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 HADHBP55084 474 aaKnown RBP12.38□□□□□ -0.43
ATG4B-207ENST00000415107 STARD6P59095 220 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 AMPD2Q01433 879 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 NRG1Q02297 640 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-207ENST00000415107 SCAPQ12770 1279 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 NR1H3Q13133 447 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 ITPRIPL2Q3MIP1 535 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 FAM133BQ5BKY9 247 aaKnown RBP12.38□□□□□ -0.43
ATG4B-207ENST00000415107 MPP7Q5T2T1 576 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 ADGRF1Q5T601 910 aa12.38□□□□□ -0.43
ATG4B-207ENST00000415107 SND1Q7KZF4 910 aaKnown RBP eCLIP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms