RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ATXN1P54253 815 aaKnown RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 ALDH18A1P54886 795 aaKnown RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 LILRA4P59901 499 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 ARF3P61204 181 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 ARF1P84077 181 aaKnown RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 ARHGAP8P85298 464 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 DUSP2Q05923 314 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 SLC14A1Q13336 389 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 SLC29A2Q14542 456 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PTCHD3Q3KNS1 767 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 AMOTQ4VCS5 1084 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 KRTCAP3Q53RY4 240 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PRR16Q569H4 304 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 UBXN11Q5T124 520 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 KIAA1324Q6UXG2 1013 aaKnown RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 RPTNQ6XPR3 784 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 KANSL1Q7Z3B3 1105 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 ANKS1BQ7Z6G8 1248 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 GALNT13Q8IUC8 556 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 FAM217AQ8IXS0 508 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 ZNF606Q8WXB4 792 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 COG3Q96JB2 828 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PACSIN1Q9BY11 444 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 C11orf54Q9H0W9 315 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 MROH8Q9H579 483 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 MTMR10Q9NXD2 777 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 SLC23A1Q9UHI7 598 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 EIF2B4Q9UI10 523 aaKnown RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 RAB21Q9UL25 225 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 HPSEQ9Y251 543 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 RAXQ9Y2V3 346 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CLDN16Q9Y5I7 305 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PTPRFP10586 1907 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 KMT2EQ8IZD2 1858 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 GOLGA6L3A6NEY3 463 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 H0Y3Z8 333 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 H0YGN5 161 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 GAAP10253 952 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 EN2P19622 333 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 IL1R2P27930 398 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PSMC6P62333 389 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 AP2B1P63010 937 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 IFI35P80217 286 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 PPARDQ03181 441 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 FAM180AQ6UWF9 173 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 IKBIPQ70UQ0 350 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 GPRIN1Q7Z2K8 1008 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 COLGALT2Q8IYK4 626 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 SYNE4Q8N205 404 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 ZNF619Q8N2I2 560 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 KCNJ9Q92806 393 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PPP2R3CQ969Q6 453 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PERPQ96FX8 193 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CCDC34Q96HJ3 373 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CRAMP1Q96RY5 1269 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 MRI1Q9BV20 369 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 TLR10Q9BXR5 811 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 HAPLN2Q9GZV7 340 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 MANSC1Q9H8J5 431 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 ABCF3Q9NUQ8 709 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 RGL1Q9NZL6 768 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 WDR35Q9P2L0 1181 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 NUDT5Q9UKK9 219 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 DNAJC16Q9Y2G8 782 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 NOTOA8MTQ0 251 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 C9orf172C9J069 976 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 H3BQ06 376 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 M0QYT0 321 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 KLK10O43240 276 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 DAPK3O43293 454 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 NRP2O60462 931 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 COQ9O75208 318 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 GOSR1O95249 250 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CST5P28325 142 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 SDHAP31040 664 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 ATP2C1P98194 919 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 LRP8Q14114 963 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 HABP2Q14520 560 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 MAN2A1Q16706 1144 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CLEC9AQ6UXN8 241 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 USP51Q70EK9 711 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 TMPRSS7Q7RTY8 843 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 ZNF605Q86T29 641 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 RASGRP3Q8IV61 690 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 P3H2Q8IVL5 708 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 TAGAPQ8N103 731 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 TTC39CQ8N584 583 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 KCTD6Q8NC69 237 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 TBC1D22AQ8WUA7 517 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CUL5Q93034 780 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CENPTQ96BT3 561 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PEX11GQ96HA9 241 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 HEMGNQ9BXL5 484 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 CARD11Q9BXL7 1154 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 TINAGL1Q9GZM7 467 aaPredicted RBP2.79□□□□□ -1.96
MCF2-204ENST00000414978 SLC25A32Q9H2D1 315 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 BRF2Q9HAW0 419 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 VEZTQ9HBM0 779 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 PREBQ9HCU5 417 aa2.79□□□□□ -1.96
MCF2-204ENST00000414978 FSCN3Q9NQT6 498 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms