RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CREG2Q8IUH2 290 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 CCDC185Q8N715 623 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 UBL4BQ8N7F7 174 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 RPGRIP1Q96KN7 1286 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 CEP295NLQ96MC4 621 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 ZNF512Q96ME7 567 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 CCSER2Q9H7U1 834 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 ANLNQ9NQW6 1124 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 TLR8Q9NR97 1041 aaKnown RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 DDIT4Q9NX09 232 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 GOLGA6AQ9NYA3 693 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 NOTCH4Q99466 2003 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 PI4K2BG5E9Z4 385 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 I6L893 689 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 PDE2AO00408 941 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 CCL16O15467 120 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 PSTPIP1O43586 416 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 LRG1P02750 347 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 ZDHHC11BP0C7U3 371 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 RARGP13631 454 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 PRLRP16471 622 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 TCP1P17987 556 aaKnown RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 NRIP1P48552 1158 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 TAF12Q16514 161 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 ZNF697Q5TEC3 545 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 PDE12Q6L8Q7 609 aaKnown RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 STRADAQ7RTN6 431 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 HS6ST3Q8IZP7 471 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 WDR6Q9NNW5 1121 aaKnown RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 GPATCH2LQ9NWQ4 482 aa16.14■□□□□ 0.17
SHMT2-202ENST00000414700 COLQQ9Y215 455 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-202ENST00000414700 EIF3HO15372 352 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHMT2-202ENST00000414700 ENDOD1O94919 500 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 RARAP10276 462 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 RWDD2BP57060 319 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 DEUP1Q05D60 604 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 FBXW10Q5XX13 1052 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 BEND5Q7L4P6 421 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 RAPGEF5Q92565 580 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 HSPH1Q92598 858 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 TRMT2BQ96GJ1 504 aaKnown RBP16.13■□□□□ 0.17
SHMT2-202ENST00000414700 ZNF576Q9H609 170 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 TLE6Q9H808 572 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 HCFC1R1Q9NWW0 138 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 COMMD8Q9NX08 183 aa16.13■□□□□ 0.17
SHMT2-202ENST00000414700 ZNF840PA6NDX5 716 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 PRPSAP2O60256 369 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 IGLV3-25P01717 112 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 CD48P09326 243 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 CKAP4Q07065 602 aaKnown RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 EIF4EBP2Q13542 120 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 CA9Q16790 459 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 ZC3H12AQ5D1E8 599 aaKnown RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 PPM1LQ5SGD2 360 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 VN1R2Q8NFZ6 395 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 RNF139Q8WU17 664 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 RNF25Q96BH1 459 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 HERPUD2Q9BSE4 406 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 SNRNP25Q9BV90 132 aaKnown RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 CAPS2Q9BXY5 557 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 CARD9Q9H257 536 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 IL21Q9HBE4 155 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 CLIC5Q9NZA1 410 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 SUFUQ9UMX1 484 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 BRWD1Q9NSI6 2320 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 AGPSO00116 658 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 CEP104O60308 925 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 TLR5O60602 858 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 RDXP35241 583 aaKnown RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 EFEMP1Q12805 493 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 HADHQ16836 314 aaKnown RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 SKIDA1Q1XH10 827 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 LRRC38Q5VT99 294 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 GAREM2Q75VX8 874 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 TMC8Q8IU68 726 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 KATNAL2Q8IYT4 538 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 PGAP3Q96FM1 320 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 LRRC3Q9BY71 257 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 SMOC2Q9H3U7 446 aa16.12■□□□□ 0.17
SHMT2-202ENST00000414700 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHMT2-202ENST00000414700 C2orf78A6NCI8 922 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 IRAK2O43187 625 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 ZMYND10O75800 440 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 DUSP6Q16828 381 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 C10orf120Q5SQS8 335 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 POLNQ7Z5Q5 900 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 MIB1Q86YT6 1006 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 ARHGAP18Q8N392 663 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 BCAS4Q8TDM0 211 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 MRPL38Q96DV4 380 aaKnown RBP16.11■□□□□ 0.17
SHMT2-202ENST00000414700 CORO1BQ9BR76 489 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 TRIM62Q9BVG3 475 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 LMAN2LQ9H0V9 348 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHMT2-202ENST00000414700 LRRD1A4D1F6 860 aa16.11■□□□□ 0.17
SHMT2-202ENST00000414700 GOLGA6BA6NDN3 693 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms