RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CD207Q9UJ71 328 aa5.25□□□□□ -1.57
VPS41-205ENST00000414632 UBQLN1Q9UMX0 589 aaKnown RBP5.25□□□□□ -1.57
VPS41-205ENST00000414632 SPEF1Q9Y4P9 236 aa5.25□□□□□ -1.57
VPS41-205ENST00000414632 NUB1Q9Y5A7 615 aa5.25□□□□□ -1.57
VPS41-205ENST00000414632 STYXL1Q9Y6J8 313 aa5.25□□□□□ -1.57
VPS41-205ENST00000414632 MYH10P35580 1976 aa5.25□□□□□ -1.57
VPS41-205ENST00000414632 CUL9Q8IWT3 2517 aa5.25□□□□□ -1.57
VPS41-205ENST00000414632 MUC3AQ02505 3323 aa5.25□□□□□ -1.57
VPS41-205ENST00000414632 NOTCH4Q99466 2003 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 UBE4BO95155 1302 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 OBSL1O75147 1896 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 PVALEFA0A1B0GWK0 134 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 SSU72P8A0A1W2PR75 194 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 HMX2A2RU54 273 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 FAM170BA6NMN3 283 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 BIN1O00499 593 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 WNT9AO14904 365 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 TGM5O43548 720 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 EXTL3O43909 919 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 KINO60870 393 aaKnown RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 RFPL2O75678 378 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 PRKD3O94806 890 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 ZNF205O95201 554 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 ITGB3P05106 788 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 KRT19P08727 400 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 OR4Q2P0C623 313 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 DLATP10515 647 aaKnown RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 SCP2P22307 547 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 ABCD1P33897 745 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 OR1D2P34982 312 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 LSSP48449 732 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CLCN4P51793 760 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 PCBP3P57721 371 aaKnown RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 SMAD4Q13485 552 aaKnown RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 PIN1Q13526 163 aaPredicted RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 KCNC3Q14003 757 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 ZBTB6Q15916 424 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CAMK4Q16566 473 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 BMT2Q1RMZ1 405 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 AAK1Q2M2I8 961 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CDKAL1Q5VV42 579 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 SPATA1Q5VX52 437 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 C9orf57Q5W0N0 161 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 SYCE2Q6PIF2 218 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 TMC5Q6UXY8 1006 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 DSTYKQ6XUX3 929 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 ZNF765Q7L2R6 523 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 C14orf80Q86SX3 495 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 TSPYL5Q86VY4 417 aaPredicted RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 BRSK2Q8IWQ3 736 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 FBXL6Q8N531 539 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CHST14Q8NCH0 376 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 BEST2Q8NFU1 509 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 OR5B17Q8NGF7 314 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 LNX1Q8TBB1 728 aaPredicted RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 SLC22A17Q8WUG5 538 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CHTF18Q8WVB6 975 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CASP10Q92851 521 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 FBXW5Q969U6 566 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CCDC47Q96A33 483 aaKnown RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 CCDC127Q96BQ5 260 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 EEF2KMTQ96G04 330 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 UROC1Q96N76 676 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 UHRF1Q96T88 793 aaPredicted RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 CLSTN3Q9BQT9 956 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 TTPALQ9BTX7 342 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 MENTQ9BUN1 341 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 MTMR12Q9C0I1 747 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CDH19Q9H159 772 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 TRIT1Q9H3H1 467 aaKnown RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 IPPKQ9H8X2 491 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 PLEKHA5Q9HAU0 1116 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 CD320Q9NPF0 282 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 AGPAT3Q9NRZ7 376 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 DPP3Q9NY33 737 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 USP15Q9Y4E8 981 aaPredicted RBP5.24□□□□□ -1.57
VPS41-205ENST00000414632 CDY1Q9Y6F8 540 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 PTPRDP23468 1912 aa5.24□□□□□ -1.57
VPS41-205ENST00000414632 TRBV23OR9-2A0A075B6M9 112 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 E2F8A0AVK6 867 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CCDC66A2RUB6 948 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 ZNF233A6NK53 670 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 TMEM189-UBE2V1I3L0A0 370 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 GSTA4O15217 222 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CCL16O15467 120 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 TPD52L2O43399 206 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 XPOTO43592 962 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 HCRTO43612 131 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 TRAPPC3O43617 180 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 NCK2O43639 380 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 EXOC3O60645 756 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 FBXO21O94952 628 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 IL18RAPO95256 599 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 LDHAP00338 332 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 GLUD1P00367 558 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 NR3C1P04150 777 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 TMEM191BP0C7N4 346 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 SRGAP2BP0DMP2 458 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CYP3A5P20815 502 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 LRPAP1P30533 357 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms