RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SELENOOQ9BVL4 669 aa17.16■□□□□ 0.34
LINC00398-201ENST00000414407 IRX2Q9BZI1 471 aaPredicted RBP17.16■□□□□ 0.34
LINC00398-201ENST00000414407 AGO1Q9UL18 857 aaKnown RBP17.16■□□□□ 0.34
LINC00398-201ENST00000414407 TRIOO75962 3097 aa17.16■□□□□ 0.34
LINC00398-201ENST00000414407 A0A087X0T9 212 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 OTOL1A6NHN0 477 aaPredicted RBP17.15■□□□□ 0.34
LINC00398-201ENST00000414407 TMCO5BA8MYB1 307 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 ADCY5O95622 1261 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 ADH1CP00326 375 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 FAM228BP0C875 321 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 CTHP32929 405 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 FLT3P36888 993 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 EIF4A3P38919 411 aaKnown RBP17.15■□□□□ 0.34
LINC00398-201ENST00000414407 RNASE9P60153 205 aaKnown RBP17.15■□□□□ 0.34
LINC00398-201ENST00000414407 ASTE1Q2TB18 679 aaPredicted RBP17.15■□□□□ 0.34
LINC00398-201ENST00000414407 IER5LQ5T953 404 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 DNAJC24Q6P3W2 148 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 RHBDF2Q6PJF5 856 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 ZNF852Q6ZMS4 543 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 TPRG1Q6ZUI0 275 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 DENND1CQ8IV53 801 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 CPXM2Q8N436 756 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 ADAM32Q8TC27 787 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 NELL2Q99435 816 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 FAM204AQ9H8W3 233 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 SPHK2Q9NRA0 654 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 METTL5Q9NRN9 209 aaKnown RBP17.15■□□□□ 0.34
LINC00398-201ENST00000414407 PARVAQ9NVD7 372 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.15■□□□□ 0.34
LINC00398-201ENST00000414407 DDIT4Q9NX09 232 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 IMPACTQ9P2X3 320 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 MRPS17Q9Y2R5 130 aaKnown RBP17.15■□□□□ 0.34
LINC00398-201ENST00000414407 TECTAO75443 2155 aa17.15■□□□□ 0.34
LINC00398-201ENST00000414407 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 FAM170AA1A519 330 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 C2CD4BA6NLJ0 364 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 HOXC11O43248 304 aaPredicted RBP17.14■□□□□ 0.33
LINC00398-201ENST00000414407 CYP17A1P05093 508 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 RRM1P23921 792 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 GJA4P35212 333 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 SLC11A2P49281 568 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 PITX1P78337 314 aaPredicted RBP17.14■□□□□ 0.33
LINC00398-201ENST00000414407 GAD2Q05329 585 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 PPP2R5DQ14738 602 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 SLC18A3Q16572 532 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 PPP1R15BQ5SWA1 713 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 ADGRF1Q5T601 910 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 PLEKHA7Q6IQ23 1121 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
LINC00398-201ENST00000414407 BNIPLQ7Z465 357 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 EXOC4Q96A65 974 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 PANX2Q96RD6 677 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 OSBPL6Q9BZF3 934 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 MFSD1Q9H3U5 465 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 DEF6Q9H4E7 631 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 MARK1Q9P0L2 795 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 PAXBP1Q9Y5B6 917 aa17.14■□□□□ 0.33
LINC00398-201ENST00000414407 ANKRD62A6NC57 917 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 SHISA7A6NL88 538 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 PRR33A8MZF0 331 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 M0QYT0 321 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
LINC00398-201ENST00000414407 ENDOD1O94919 500 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 APOEP02649 317 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 PDGFRAP16234 1089 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 CCR1P32246 355 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 PTPN9P43378 593 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 MAMLD1Q13495 774 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 LY6G5CQ5SRR4 150 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 TRNP1Q6NT89 227 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 PHLDB2Q86SQ0 1253 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 FAM3CQ92520 227 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 PBXIP1Q96AQ6 731 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 BTN2A3PQ96KV6 586 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 CCDC42Q96M95 316 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 CHP1Q99653 195 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 DDX50Q9BQ39 737 aaKnown RBP17.13■□□□□ 0.33
LINC00398-201ENST00000414407 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
LINC00398-201ENST00000414407 TBC1D17Q9HA65 648 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 C11orf16Q9NQ32 467 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 SLC12A6Q9UHW9 1150 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 SCINQ9Y6U3 715 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 TICRRQ7Z2Z1 1910 aa17.13■□□□□ 0.33
LINC00398-201ENST00000414407 CUL9Q8IWT3 2517 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 KCNU1A8MYU2 1149 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 GFRA2O00451 464 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 TRDMT1O14717 391 aaKnown RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 AKR1B10O60218 316 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 ACSL4O60488 711 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 ADH5P11766 374 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 ABCB4P21439 1286 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 SDC4P31431 198 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 RFC1P35251 1148 aaPredicted RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 EIF2DP41214 584 aaKnown RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 SOX9P48436 509 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 CXCR3P49682 368 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 SULT1E1P49888 294 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 CLCN5P51795 746 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms