RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 USP50Q70EL3 339 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 OVCH2Q7RTZ1 564 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TADA2BQ86TJ2 420 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MICU3Q86XE3 530 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CPOQ8IVL8 374 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ZDHHC14Q8IZN3 488 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CARFQ8N187 725 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 DPP10Q8N608 796 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CELF5Q8N6W0 485 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 EFHBQ8N7U6 833 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 KCTD6Q8NC69 237 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ZBTB34Q8NCN2 500 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 HIPK4Q8NE63 616 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 C1orf162Q8NEQ5 155 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SPATA20Q8TB22 786 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MYCBPAPQ8TBZ2 947 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 GPT2Q8TD30 523 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SCFD2Q8WU76 684 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 METTL21AQ8WXB1 218 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 IP6K1Q92551 441 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ZUFSPQ96AP4 578 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SAAL1Q96ER3 474 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TCTN2Q96GX1 697 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SUCLG2Q96I99 432 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RBM41Q96IZ5 413 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ADAD1Q96M93 576 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 LMF1Q96S06 567 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SMC6Q96SB8 1091 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SIN3AQ96ST3 1273 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CRBNQ96SW2 442 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ACO2Q99798 780 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MXD3Q9BW11 206 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 BRIP1Q9BX63 1249 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TTYH3Q9C0H2 523 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PRDM14Q9GZV8 571 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PAIP1Q9H074 479 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MAGEH1Q9H213 219 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 HSD3B7Q9H2F3 369 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RAD21L1Q9H4I0 556 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 COPS7BQ9H9Q2 264 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 DMRT3Q9NQL9 472 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 KRT84Q9NSB2 600 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 FARSBQ9NSD9 589 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 IL37Q9NZH6 218 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 HMGXB4Q9UGU5 601 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MBD1Q9UIS9 605 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ANGPTL2Q9UKU9 493 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SLC39A10Q9ULF5 831 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TTC7AQ9ULT0 858 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 GAB2Q9UQC2 676 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 DLGAP4Q9Y2H0 992 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 DERAQ9Y315 318 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PCDHA5Q9Y5H7 936 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 IRAK3Q9Y616 596 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PMF1-BGLAPU3KQ54 211 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PRDM2Q13029 1718 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 C15orf38-AP3S2A0A0A6YYH1 394 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 A0A0U1RQK1 487 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 C1orf232A0A0U1RR37 186 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 RNF103-CHMP3A0A140T963 221 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 LOC105371267A0A1B0GV96 52 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF320A2RRD8 509 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 FITM1A5D6W6 292 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 E7EVH7 732 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 FAM227AF5H4B4 570 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 GCOM1H8Y6P7 765 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 HRKO00198 91 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 RNF103O00237 685 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PSMD14O00487 310 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CXCL11O14625 94 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TNFRSF10CO14798 259 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PGRMC2O15173 223 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SHOXO15266 292 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PROM1O43490 865 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 NCK2O43639 380 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PHF2O75151 1096 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 RECQL4O94761 1208 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 SEC24DO94855 1032 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ERLIN2O94905 339 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CAMTA2O94983 1202 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 MLYCDO95822 493 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ITGB3P05106 788 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 URODP06132 367 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ANXA6P08133 673 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 FGF4P08620 206 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 MYZAPP0CAP1 466 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PRR35P0CG20 571 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TPBGLP0DKB5 382 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 C6P13671 934 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ANPEPP15144 967 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 NME1P15531 152 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PI3P19957 117 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 PDCP20941 246 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 S100A1P23297 94 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CFL1P23528 166 aaKnown RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 NFKBIAP25963 317 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 ADSLP30566 484 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 TLX1P31314 330 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-203ENST00000414174 GBP1P32455 592 aa3.79□□□□□ -1.8
SF3B1-203ENST00000414174 CIITAP33076 1130 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms