RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 EGFP01133 1207 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 IGLV3-25P01717 112 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 IGLV3-27P01718 113 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TPM3P06753 285 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 HOXB3P14651 431 aaPredicted RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 AOC1P19801 751 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 AVPR2P30518 371 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 HOXC13P31276 330 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 OPRD1P41143 372 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 PRKCIP41743 596 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 NSFP46459 744 aaKnown RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 GABRB2P47870 512 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 GALK1P51570 392 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 SGSHP51688 502 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 ATXN1P54253 815 aaKnown RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TBX4P57082 545 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 COG7P83436 770 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 FOXK1P85037 733 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 ZBED6P86452 979 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 KLHL30Q0D2K2 578 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 FZD5Q13467 585 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 ANO4Q32M45 955 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 RAB6CQ53S08 254 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TDRD12Q587J7 1177 aaKnown RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 EFHC1Q5JVL4 640 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 SPECC1LQ69YQ0 1117 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 FSTL4Q6MZW2 842 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 SARM1Q6SZW1 724 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 ZNF852Q6ZMS4 543 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TRIM72Q6ZMU5 477 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 Q6ZS52 159 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TOGARAM2Q6ZUX3 1019 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 MON1BQ7L1V2 547 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 SLC26A9Q7LBE3 791 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TMC6Q7Z403 805 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 RALGPS2Q86X27 583 aaPredicted RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 SUGP1Q8IWZ8 645 aaKnown RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 NAT16Q8N8M0 369 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 ZNF397Q8NF99 534 aaPredicted RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 EZH1Q92800 747 aaPredicted RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 MYEOVQ96EZ4 313 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 SHDQ96IW2 340 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TRIM5Q9C035 493 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 RAB6CQ9H0N0 254 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 C8orf33Q9H7E9 229 aaPredicted RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 ADAM22Q9P0K1 906 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TBC1D14Q9P2M4 693 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 LSM7Q9UK45 103 aaKnown RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 HBS1LQ9Y450 684 aaKnown RBP8.04□□□□□ -1.12
CPSF4-202ENST00000412686 NCOR1O75376 2440 aa8.04□□□□□ -1.12
CPSF4-202ENST00000412686 TCRBV5S1A1TA0A578 114 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 NEDD8-MDP1E9PL57 170 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 I6L893 689 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 SLC9A3R1O14745 358 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 TSPAN3O60637 253 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 MOCS2O96007 188 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 GLI1P08151 1106 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 CCDC172P0C7W6 258 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 CHRNB1P11230 501 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ADH5P11766 374 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 RRM1P23921 792 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 SLC6A4P31645 630 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 GGCXP38435 758 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 SULT1E1P49888 294 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ZNF75DP51815 510 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ADKP55263 362 aaKnown RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 KDSRQ06136 332 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 NME3Q13232 169 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 EIF4EBP2Q13542 120 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 GAS6Q14393 721 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 C15orf59Q2T9L4 293 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ZC3H12AQ5D1E8 599 aaKnown RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 SH3PXD2AQ5TCZ1 1133 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 NADSYN1Q6IA69 706 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ACAD10Q6JQN1 1059 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 PKN3Q6P5Z2 889 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 WDR59Q6PJI9 974 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 BEND5Q7L4P6 421 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 PHF13Q86YI8 300 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ZDHHC17Q8IUH5 632 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 SLC39A13Q96H72 371 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 CFAP57Q96MR6 1250 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 SERPINB11Q96P15 392 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 TBCBQ99426 244 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 NPY6RQ99463 290 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 P2RY13Q9BPV8 354 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 BBS2Q9BXC9 721 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 FAM204AQ9H8W3 233 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 LMAN1LQ9HAT1 526 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ZDHHC4Q9NPG8 344 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ANLNQ9NQW6 1124 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 SPHK2Q9NRA0 654 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 TMPRSS4Q9NRS4 437 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 POLR3BQ9NW08 1133 aaPredicted RBP8.03□□□□□ -1.12
CPSF4-202ENST00000412686 ASNSD1Q9NWL6 643 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 C2orf42Q9NWW7 574 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 DDIT4Q9NX09 232 aa8.03□□□□□ -1.12
CPSF4-202ENST00000412686 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms