RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SSX3Q99909 188 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HEPHQ9BQS7 1158 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TCEAL7Q9BRU2 100 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 LDAHQ9H6V9 325 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KAT8Q9H7Z6 458 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PRDM16Q9HAZ2 1276 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SPINK5Q9NQ38 1064 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HPF1Q9NWY4 346 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MCM9Q9NXL9 1143 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SAMD4AQ9UPU9 718 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HIF3AQ9Y2N7 669 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FCHO1O14526 889 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KATNA1O75449 491 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 IFNGP01579 166 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PWP1Q13610 501 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ANKRD40Q6AI12 368 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 WDR59Q6PJI9 974 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZBTB49Q6ZSB9 765 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TAS1R3Q7RTX0 852 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SLC16A9Q7RTY1 509 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FAM20CQ8IXL6 584 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TCTE3Q8IZS6 198 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TXNDC5Q8NBS9 432 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 OR2L5Q8NG80 312 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SCFD2Q8WU76 684 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MALSU1Q96EH3 234 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FAR2Q96K12 515 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 EIF2AK1Q9BQI3 630 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TMED9Q9BVK6 235 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CEP41Q9BYV8 373 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 POLKQ9UBT6 870 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 DUSP12Q9UNI6 340 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KANTRA0A1W2PQU2 76 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PLK4O00444 970 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 LIN7AO14910 233 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MSH4O15457 936 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FAM20BO75063 409 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RSL1D1O76021 490 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZSCAN5DPP0CG00 497 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF14P17017 642 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HTR3AP46098 478 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SEC24CP53992 1094 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MAP4K2Q12851 820 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 BNIP2Q12982 314 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 DDB1Q16531 1140 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ARHGAP15Q53QZ3 475 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ACAD10Q6JQN1 1059 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZC3H7AQ8IWR0 971 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PHTF2Q8N3S3 785 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FAM133AQ8N9E0 248 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 OR52L1Q8NGH7 329 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SEC14L1Q92503 715 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 EPYCQ99645 322 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CHP1Q99653 195 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 C17orf62Q9BQA9 187 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 AGXT2Q9BYV1 514 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SLC2A8Q9NY64 477 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SUCOQ9UBS9 1254 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HMGXB4Q9UGU5 601 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KIF25Q9UIL4 384 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 EDARQ9UNE0 448 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 IGF1RP08069 1367 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 PGRMC1O00264 195 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KIAA0355O15063 1070 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 HLA-DQA2P01906 255 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ATP6V1B1P15313 513 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ITGALP20701 1170 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CTCFP49711 727 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RBM6P78332 1123 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MPP3Q13368 585 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 BMPR2Q13873 1038 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SNAPC1Q16533 368 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RGS21Q2M5E4 152 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 UAP1L1Q3KQV9 507 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MINDY4Q4G0A6 757 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RNASE10Q5GAN6 216 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 LYRM7Q5U5X0 104 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 RNF43Q68DV7 783 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF425Q6IV72 752 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TSHZ1Q6ZSZ6 1077 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 FAM92BQ6ZTR7 304 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MTDHQ86UE4 582 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MYO1HQ8N1T3 1032 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CCNYL1Q8N7R7 359 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KBTBD8Q8NFY9 601 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF420Q8TAQ5 688 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MCOLN3Q8TDD5 553 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KRT35Q92764 455 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TMCO6Q96DC7 493 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 GMCL1Q96IK5 515 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 ECSITQ9BQ95 431 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 TOR3AQ9H497 397 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 C19orf44Q9H6X5 657 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 UNKLQ9H9P5 680 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 MOV10Q9HCE1 1003 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 BSDC1Q9NW68 430 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 UBQLN1Q9UMX0 589 aaKnown RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 SPIN1Q9Y657 262 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-202ENST00000411767 KDRP35968 1356 aa4.7□□□□□ -1.66
PTPN13-202ENST00000411767 CADPSQ9ULU8 1353 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms