RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
LIMS1-205ENST00000410093 GOLGA2P5Q9HBQ8 144 aa14.06□□□□□ -0.16
LIMS1-205ENST00000410093 EIF2B3Q9NR50 452 aaKnown RBP14.06□□□□□ -0.16
LIMS1-205ENST00000410093 RAB6BQ9NRW1 208 aa14.06□□□□□ -0.16
LIMS1-205ENST00000410093 ETNK2Q9NVF9 386 aa14.06□□□□□ -0.16
LIMS1-205ENST00000410093 HEY1Q9Y5J3 304 aa14.06□□□□□ -0.16
LIMS1-205ENST00000410093 IKBKGQ9Y6K9 419 aa14.06□□□□□ -0.16
LIMS1-205ENST00000410093 POC1B-GALNT4F8VUJ3 575 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 PPP1R12AO14974 1030 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 FSBPO95073 299 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 GCAP28676 217 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 TKTP29401 623 aaKnown RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 MLH1P40692 756 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 GPX6P59796 221 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 DSC3Q14574 896 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 UPP1Q16831 310 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 LACTB2Q53H82 288 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 MDH1BQ5I0G3 518 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 FNBP1LQ5T0N5 605 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 ANKRD22Q5VYY1 191 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 HEATR6Q6AI08 1181 aaKnown RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 NPNTQ6UXI9 565 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CHRDL2Q6WN34 429 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 PAQR9Q6ZVX9 377 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 TFB1MQ8WVM0 346 aaKnown RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 ZFP42Q96MM3 310 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 OLFM3Q96PB7 478 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 GAD1Q99259 594 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 SEZ6LQ9BYH1 1024 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CSNK1G1Q9HCP0 422 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 MTMR10Q9NXD2 777 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 ZNF180Q9UJW8 692 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 USP3Q9Y6I4 520 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CAPN9O14815 690 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 TM9SF1O15321 606 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 MTSS1O43312 755 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 OPHN1O60890 802 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 DGKIO75912 1065 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 TMEM63AO94886 807 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 SUN1O94901 812 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 GSTA1P08263 222 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 RBL1P28749 1068 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CYP2C18P33260 490 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 GLUD2P49448 558 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 TKTL1P51854 596 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 DAOAP59103 153 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 SEMA5AQ13591 1074 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 FASTKD3Q14CZ7 662 aaKnown RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 PAFAH1B3Q15102 231 aaKnown RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CA9Q16790 459 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 BBS9Q3SYG4 887 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 DCAF6Q58WW2 860 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 ZNF618Q5T7W0 954 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CCSAPQ6IQ19 270 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 AGMOQ6ZNB7 445 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 RNF180Q86T96 592 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 FAM35AQ86V20 835 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 LRRC34Q8IZ02 419 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CYP4X1Q8N118 509 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 KCTD15Q96SI1 283 aaPredicted RBP14.05□□□□□ -0.16
LIMS1-205ENST00000410093 NAT9Q9BTE0 207 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 RABEP2Q9H5N1 569 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 KRT82Q9NSB4 513 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 CTNNAL1Q9UBT7 734 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 TBK1Q9UHD2 729 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 PADI3Q9ULW8 664 aa14.05□□□□□ -0.16
LIMS1-205ENST00000410093 GOLGA8MH3BSY2 632 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 M0QZQ0 153 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 AP1G2O75843 785 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 ASGR1P07306 291 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 TYMPP19971 482 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 HTR7P34969 479 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 THPOP40225 353 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 CLCNKBP51801 687 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 DEUP1Q05D60 604 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 IFT88Q13099 833 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 TUSC3Q13454 348 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 NCBP2-AS2Q69YL0 99 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 DCLRE1AQ6PJP8 1040 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 ANKMY2Q8IV38 441 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 DENND1AQ8TEH3 1009 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 FBF1Q8TES7 1133 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 HTR3CQ8WXA8 447 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 MTBPQ96DY7 904 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 PAFAH2Q99487 392 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 CRTAC1Q9NQ79 661 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 GPATCH2LQ9NWQ4 482 aa14.04□□□□□ -0.16
LIMS1-205ENST00000410093 COL4A4P53420 1690 aaPredicted RBP14.03□□□□□ -0.16
LIMS1-205ENST00000410093 A0A0A0MRY4 1105 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 M0QYT0 321 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 SNX3O60493 162 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 ASMTLO95671 621 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 EOMESO95936 686 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 PGK1P00558 417 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms