RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 NOP2P46087 812 aaKnown RBP21.46■■□□□ 1.03
C4orf48-202ENST00000409860 HARS2P49590 506 aaKnown RBP21.46■■□□□ 1.03
C4orf48-202ENST00000409860 ZXDBP98169 803 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 PIGHQ14442 188 aaPredicted RBP21.46■■□□□ 1.03
C4orf48-202ENST00000409860 CC2D1AQ6P1N0 951 aaPredicted RBP21.46■■□□□ 1.03
C4orf48-202ENST00000409860 UNC45BQ8IWX7 931 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 KIAA1958Q8N8K9 716 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 ST13P5Q8NFI4 369 aaPredicted RBP21.46■■□□□ 1.03
C4orf48-202ENST00000409860 DEPDC1BQ8WUY9 529 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 FGF14Q92915 247 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 RSPRY1Q96DX4 576 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 TSGA10Q9BZW7 698 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 OSGEPQ9NPF4 335 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 IGSF9Q9P2J2 1179 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 LIMD1Q9UGP4 676 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 DENND4CQ5VZ89 1909 aa21.46■■□□□ 1.03
C4orf48-202ENST00000409860 EYSQ5T1H1 3165 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 DOCK8Q8NF50 2099 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 E2F8A0AVK6 867 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 RCCD1A6NED2 376 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 BTNL10A8MVZ5 291 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 RNF8O76064 485 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 IGLV3-27P01718 113 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 BMP1P13497 986 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 CCR1P32246 355 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 EIF4EBP2Q13542 120 aaPredicted RBP21.45■■□□□ 1.02
C4orf48-202ENST00000409860 BNIPLQ7Z465 357 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 YAF2Q8IY57 180 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 ADAMTS19Q8TE59 1207 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 CENPIQ92674 756 aaPredicted RBP21.45■■□□□ 1.02
C4orf48-202ENST00000409860 SLC39A13Q96H72 371 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 BTBD6Q96KE9 485 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 CALR3Q96L12 384 aaKnown RBP21.45■■□□□ 1.02
C4orf48-202ENST00000409860 FCRL2Q96LA5 508 aaPredicted RBP21.45■■□□□ 1.02
C4orf48-202ENST00000409860 NCAPGQ9BPX3 1015 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 ADAM33Q9BZ11 813 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 LACRTQ9GZZ8 138 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 PIGVQ9NUD9 493 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.45■■□□□ 1.02
C4orf48-202ENST00000409860 THG1LQ9NWX6 298 aaKnown RBP21.45■■□□□ 1.02
C4orf48-202ENST00000409860 ZNF510Q9Y2H8 683 aa21.45■■□□□ 1.02
C4orf48-202ENST00000409860 ENDOD1O94919 500 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 PSMC3P17980 439 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 CORO1AP31146 461 aaKnown RBP21.44■■□□□ 1.02
C4orf48-202ENST00000409860 CXCR3P49682 368 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 ZNF252P-AS1Q0IIN9 211 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 MTA1Q13330 715 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 PPP2R5DQ14738 602 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 ACAP1Q15027 740 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 ZC3H12AQ5D1E8 599 aaKnown RBP21.44■■□□□ 1.02
C4orf48-202ENST00000409860 BRMS1LQ5PSV4 323 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 VITQ6UXI7 678 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 MFSD6LQ8IWD5 586 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 CALCOCO1Q9P1Z2 691 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 SLC12A6Q9UHW9 1150 aa21.44■■□□□ 1.02
C4orf48-202ENST00000409860 SLC9A3R1O14745 358 aaPredicted RBP21.43■■□□□ 1.02
C4orf48-202ENST00000409860 ARHGAP25P42331 645 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 HADHBP55084 474 aaKnown RBP21.43■■□□□ 1.02
C4orf48-202ENST00000409860 NAP1L1P55209 391 aaKnown RBP21.43■■□□□ 1.02
C4orf48-202ENST00000409860 HDAC4P56524 1084 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 SH3PXD2AQ5TCZ1 1133 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 HTR3DQ70Z44 454 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.43■■□□□ 1.02
C4orf48-202ENST00000409860 NIPA2Q8N8Q9 360 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 ATP6V0D2Q8N8Y2 350 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 RIN3Q8TB24 985 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 WBP2Q969T9 261 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 LRRC3BQ96PB8 259 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 WDCPQ9H6R7 721 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 KCNK12Q9HB15 430 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 TBC1D14Q9P2M4 693 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 PPP2R2CQ9Y2T4 447 aa21.43■■□□□ 1.02
C4orf48-202ENST00000409860 SPTBN5Q9NRC6 3674 aaKnown RBP21.43■■□□□ 1.02
C4orf48-202ENST00000409860 NUP210Q8TEM1 1887 aaPredicted RBP21.43■■□□□ 1.02
C4orf48-202ENST00000409860 TMEM110-MUSTN1A8MSY1 372 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 KRT86O43790 486 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 PROSCO94903 275 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 LATS1O95835 1130 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 MOCS2O96007 188 aaPredicted RBP21.42■■□□□ 1.02
C4orf48-202ENST00000409860 MAN1A1P33908 653 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 IFNAR2P48551 515 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 SLC11A2P49281 568 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 ATXN1P54253 815 aaKnown RBP21.42■■□□□ 1.02
C4orf48-202ENST00000409860 FCHO2Q0JRZ9 810 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 GRM2Q14416 872 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 MESDQ14696 234 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 IFI16Q16666 785 aaKnown RBP21.42■■□□□ 1.02
C4orf48-202ENST00000409860 ARL13BQ3SXY8 428 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 Q6ZNB5 142 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 FAM131BQ86XD5 332 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 DENND1CQ8IV53 801 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 RSAD2Q8WXG1 361 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 RPP25Q9BUL9 199 aaKnown RBP21.42■■□□□ 1.02
C4orf48-202ENST00000409860 TRMT61BQ9BVS5 477 aaKnown RBP21.42■■□□□ 1.02
C4orf48-202ENST00000409860 PLA2G2FQ9BZM2 168 aa21.42■■□□□ 1.02
C4orf48-202ENST00000409860 PRUNE2Q8WUY3 3088 aa21.41■■□□□ 1.02
C4orf48-202ENST00000409860 C19orf67A6NJJ6 358 aa21.41■■□□□ 1.02
C4orf48-202ENST00000409860 SCAMP3O14828 347 aaKnown RBP21.41■■□□□ 1.02
C4orf48-202ENST00000409860 GREM1O60565 184 aa21.41■■□□□ 1.02
C4orf48-202ENST00000409860 KLKB1P03952 638 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms