RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 ATP6V0D2Q8N8Y2 350 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 TPCN2Q8NHX9 752 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 USP13Q92995 863 aaPredicted RBP17.32■□□□□ 0.36
IMP4-202ENST00000409649 ELSPBP1Q96BH3 223 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 SLC39A13Q96H72 371 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 ALS2CR12Q96Q35 445 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 DDX50Q9BQ39 737 aaKnown RBP17.32■□□□□ 0.36
IMP4-202ENST00000409649 KCND1Q9NSA2 647 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 SMPD4Q9NXE4 827 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 TBC1D14Q9P2M4 693 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 GUCA1BQ9UMX6 200 aa17.32■□□□□ 0.36
IMP4-202ENST00000409649 MACROD2A1Z1Q3 448 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 LEFTY2O00292 366 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 MDM4O15151 490 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 PRPSAP2O60256 369 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 ECI2O75521 394 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 OGDHQ02218 1023 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 MESDQ14696 234 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 C15orf59Q2T9L4 293 aaPredicted RBP17.31■□□□□ 0.36
IMP4-202ENST00000409649 CC2D1AQ6P1N0 951 aaPredicted RBP17.31■□□□□ 0.36
IMP4-202ENST00000409649 HTR3DQ70Z44 454 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 PSTKQ8IV42 348 aaKnown RBP17.31■□□□□ 0.36
IMP4-202ENST00000409649 ADAM32Q8TC27 787 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 KIAA1524Q8TCG1 905 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 SH3RF2Q8TEC5 729 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 DEPDC1BQ8WUY9 529 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 NTAN1Q96AB6 310 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 OTUB2Q96DC9 234 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 ZFRQ96KR1 1074 aaKnown RBP17.31■□□□□ 0.36
IMP4-202ENST00000409649 BTN2A3PQ96KV6 586 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 IRX2Q9BZI1 471 aaPredicted RBP17.31■□□□□ 0.36
IMP4-202ENST00000409649 LZTFL1Q9NQ48 299 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
IMP4-202ENST00000409649 SZT2Q5T011 3432 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 SYNJ2BP-COX16A0A087WUM0 186 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 NRG2O14511 850 aaPredicted RBP17.3■□□□□ 0.36
IMP4-202ENST00000409649 MSI1O43347 362 aaKnown RBP17.3■□□□□ 0.36
IMP4-202ENST00000409649 STC2O76061 302 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 HDAC4P56524 1084 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 ZNF252P-AS1Q0IIN9 211 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 USP4Q13107 963 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 ZNF77Q15935 545 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 BOLA3Q53S33 107 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 OTUD1Q5VV17 481 aaPredicted RBP17.3■□□□□ 0.36
IMP4-202ENST00000409649 DAAM2Q86T65 1068 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 CCAR2Q8N163 923 aaKnown RBP17.3■□□□□ 0.36
IMP4-202ENST00000409649 TRIM58Q8NG06 486 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 BPIFB1Q8TDL5 484 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 FCRL2Q96LA5 508 aaPredicted RBP17.3■□□□□ 0.36
IMP4-202ENST00000409649 HAPLN3Q96S86 360 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 TRIM7Q9C029 511 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 COX16Q9P0S2 106 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 CFAP97Q9P2B7 532 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 TFR2Q9UP52 801 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 DUSP10Q9Y6W6 482 aa17.3■□□□□ 0.36
IMP4-202ENST00000409649 BRWD1Q9NSI6 2320 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 KCNU1A8MYU2 1149 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 ANHXE9PGG2 379 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 BUB1O43683 1085 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 SPOPO43791 374 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 BUB1BO60566 1050 aaPredicted RBP17.29■□□□□ 0.36
IMP4-202ENST00000409649 LRCH4O75427 683 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 PRAMEF12O95522 483 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 KRT7P08729 469 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 CORO1AP31146 461 aaKnown RBP17.29■□□□□ 0.36
IMP4-202ENST00000409649 CHKAP35790 457 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 ZNF135P52742 658 aaPredicted RBP17.29■□□□□ 0.36
IMP4-202ENST00000409649 PITX1P78337 314 aaPredicted RBP17.29■□□□□ 0.36
IMP4-202ENST00000409649 TFF2Q03403 129 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 ZC3H12AQ5D1E8 599 aaKnown RBP17.29■□□□□ 0.36
IMP4-202ENST00000409649 LRRC38Q5VT99 294 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 SLFN11Q7Z7L1 901 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 MFSD6LQ8IWD5 586 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 YAF2Q8IY57 180 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 TEKT4Q8WW24 435 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 BTBD6Q96KE9 485 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 RPGRIP1Q96KN7 1286 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 GKN1Q9NS71 199 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 ARHGEF38Q9NXL2 777 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 PYCARDQ9ULZ3 195 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 USP18Q9UMW8 372 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.29■□□□□ 0.36
IMP4-202ENST00000409649 OBSL1O75147 1896 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 DENND4AQ7Z401 1863 aa17.29■□□□□ 0.36
IMP4-202ENST00000409649 ANAPC1Q9H1A4 1944 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 TMEM110-MUSTN1A8MSY1 372 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 HEPACAM2A8MVW5 462 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 C2CD4DB7Z1M9 353 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 KIF5CO60282 957 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 HMBSP08397 361 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 PSMC3P17980 439 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 TFE3P19532 575 aaPredicted RBP17.28■□□□□ 0.36
IMP4-202ENST00000409649 MIPP30301 263 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 ADRA1BP35368 520 aa17.28■□□□□ 0.36
IMP4-202ENST00000409649 SSR1P43307 286 aaKnown RBP17.28■□□□□ 0.36
IMP4-202ENST00000409649 KCNQ1P51787 676 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms