RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SLC29A2Q14542 456 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 B3GNT9Q6UX72 402 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 MYCBPAPQ8TBZ2 947 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 BCAS4Q8TDM0 211 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 MORC4Q8TE76 937 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 FBF1Q8TES7 1133 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 CASKIN2Q8WXE0 1202 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 SMG7Q92540 1137 aaKnown RBP11.78□□□□□ -0.52
SNX13-202ENST00000409604 CINPQ9BW66 212 aaPredicted RBP11.78□□□□□ -0.52
SNX13-202ENST00000409604 NSRP1Q9H0G5 558 aaKnown RBP11.78□□□□□ -0.52
SNX13-202ENST00000409604 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 IGKV6D-21A0A0A0MT36 114 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 PAPSS1O43252 624 aaPredicted RBP11.78□□□□□ -0.52
SNX13-202ENST00000409604 RAMP2O60895 175 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 BANF1O75531 89 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 FBXO21O94952 628 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 CUL1Q13616 776 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 ITPRIPL1Q6GPH6 555 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 C11orf63Q6NUN7 778 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 OSBPL7Q9BZF2 842 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 ANKRD31Q8N7Z5 1873 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 EBAG9O00559 213 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 AKT1P31749 480 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 NOS2P35228 1153 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 KRT33BQ14525 404 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.52
SNX13-202ENST00000409604 MROH9Q5TGP6 573 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 TXNRD3NBQ6F5E7 133 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 VSIG1Q86XK7 387 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 PIWIL1Q96J94 861 aaKnown RBP11.77□□□□□ -0.52
SNX13-202ENST00000409604 CABS1Q96KC9 395 aa11.77□□□□□ -0.52
SNX13-202ENST00000409604 FCRL2Q96LA5 508 aaPredicted RBP11.77□□□□□ -0.52
SNX13-202ENST00000409604 PCNTO95613 3336 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 ZBTB42B2RXF5 422 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 C8AP07357 584 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 IGFBP6P24592 240 aaPredicted RBP11.77□□□□□ -0.53
SNX13-202ENST00000409604 OXCT1P55809 520 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 RHOAP61586 193 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 ALS2CLQ60I27 953 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 TXNDC8Q6A555 127 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 LINGO4Q6UY18 593 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 WHAMMQ8TF30 809 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 TPX2Q9ULW0 747 aaKnown RBP11.77□□□□□ -0.53
SNX13-202ENST00000409604 LRP5O75197 1615 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 ERCC2P18074 760 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 TYK2P29597 1187 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 EML3Q32P44 896 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 GPR158Q5T848 1215 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 ITIH5Q86UX2 942 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 MFN1Q8IWA4 741 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 TOP6BLQ8N6T0 577 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 C20orf96Q9NUD7 363 aaPredicted RBP11.77□□□□□ -0.53
SNX13-202ENST00000409604 RPS6KL1Q9Y6S9 549 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 MORC2Q9Y6X9 1032 aaPredicted RBP11.77□□□□□ -0.53
SNX13-202ENST00000409604 EVPLQ92817 2033 aa11.77□□□□□ -0.53
SNX13-202ENST00000409604 KDELR1P24390 212 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 CCDC6Q16204 474 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 CDCA2Q69YH5 1023 aaPredicted RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 LCLAT1Q6UWP7 414 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 NR2E1Q9Y466 385 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 ANGPTL3Q9Y5C1 460 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 LY75O60449 1722 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 COL11A2P13942 1736 aaPredicted RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 FAM155AB1AL88 458 aaPredicted RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 E5RI56 91 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 KPNA3O00505 521 aaPredicted RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 DNAJC6O75061 913 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 STBD1O95210 358 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 KPNA1P52294 538 aaPredicted RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 ZRANB3Q5FWF4 1079 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 CES5AQ6NT32 575 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 EMBQ6PCB8 327 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 CCNI2Q6ZMN8 369 aaPredicted RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 FUKQ8N0W3 1084 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 ARHGAP18Q8N392 663 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 COLGALT1Q8NBJ5 622 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 CCHCR1Q8TD31 782 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 ARHGEF2Q92974 986 aaKnown RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 SERPINB11Q96P15 392 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 TTYH3Q9C0H2 523 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 MCOLN1Q9GZU1 580 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 ABCG8Q9H221 673 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 PRDM12Q9H4Q4 367 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 PLA2G4CQ9UP65 541 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 R3HDM2Q9Y2K5 976 aaKnown RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 SLC2A3P11169 496 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 ITGB6P18564 788 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 POLD3Q15054 466 aaPredicted RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 PCBP1Q15365 356 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNX13-202ENST00000409604 TTC9BQ8N6N2 239 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 EXD1Q8NHP7 514 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 SLC22A17Q8WUG5 538 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 HSFY1Q96LI6 401 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 DDX50Q9BQ39 737 aaKnown RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 ABCC13Q9NSE7 274 aa11.76□□□□□ -0.53
SNX13-202ENST00000409604 NOCTQ9UK39 431 aaKnown RBP11.76□□□□□ -0.53
SNX13-202ENST00000409604 PSTPIP1O43586 416 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms