RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 TBL1XO60907 577 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 DLGAP3O95886 979 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 INHBAP08476 426 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CCR1P32246 355 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SH3BP5LQ7L8J4 393 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SLC20A1Q8WUM9 679 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 KLC2Q9H0B6 622 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 HAUS4Q9H6D7 363 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 NDUFA13Q9P0J0 144 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 PDP2Q9P2J9 529 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CFLARO15519 480 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 MYBL1P10243 752 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 MED21Q13503 144 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SHHQ15465 462 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 PTRHD1Q6GMV3 140 aaKnown RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 GRASPQ7Z6J2 395 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SRLQ86TD4 932 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 RBBP8NLQ8NC74 664 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.52□□□□□ -1.213e-9■■□□□ 14.2
SCN9A-202ENST00000409435 PKD2L2Q9NZM6 624 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 APPL1Q9UKG1 709 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 RNF103-CHMP3A0A140T963 221 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 PDXKO00764 312 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 GSNP06396 782 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 VDRP11473 427 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CXCR2P25025 360 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SNRPD1P62314 119 aaKnown RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 GRM2Q14416 872 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 ITPRIPL2Q3MIP1 535 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 POM121L1PQ3SYA9 428 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 ANO7Q6IWH7 933 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CDKL3Q8IVW4 592 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CCDC60Q8IWA6 550 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 LZTR1Q8N653 840 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 FAM96AQ9H5X1 160 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CYP3A43Q9HB55 503 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 ZNF112Q9UJU3 913 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 MORC2Q9Y6X9 1032 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 LACTBL1A8MY62 500 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 E2F6O75461 281 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CHEK2O96017 543 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 AKR1D1P51857 326 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 GUCY2DQ02846 1103 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 RUNX1T1Q06455 604 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SLC12A1Q13621 1099 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 NCAPHQ15003 741 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 ZNF792Q3KQV3 632 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SRRM1Q8IYB3 904 aaKnown RBP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CCDC33Q8N5R6 958 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
SCN9A-202ENST00000409435 GRIN3AQ8TCU5 1115 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 IGDCC4Q8TDY8 1250 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 AUTS2Q8WXX7 1259 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 PCDHA7Q9UN72 937 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 CNTNAP5Q8WYK1 1306 aa7.52□□□□□ -1.21
SCN9A-202ENST00000409435 KCNK3O14649 394 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 STX7O15400 261 aaKnown RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 RPL6Q02878 288 aaKnown RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 BST2Q10589 180 aaKnown RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 LRRC26Q2I0M4 334 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 ECHDC2Q86YB7 292 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 C7orf43Q8WVR3 580 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 EXT2Q93063 718 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 TOX2Q96NM4 488 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 ECT2Q9H8V3 914 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 RAD18Q9NS91 495 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 PARVAQ9NVD7 372 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 CNOT8Q9UFF9 292 aaKnown RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 SFMBT1Q9UHJ3 866 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 HES2Q9Y543 173 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 APOL1O14791 398 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 GRM6O15303 877 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 BRAFP15056 766 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 SERPINB4P48594 390 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 TGM3Q08188 693 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 TSC22D1Q15714 1073 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 TBCCQ15814 346 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 ZRANB3Q5FWF4 1079 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 NAA35Q5VZE5 725 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 C11orf57Q6ZUT1 292 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 METTL3Q86U44 580 aaKnown RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 PPHLN1Q8NEY8 458 aaKnown RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 BPIFB1Q8TDL5 484 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 CD101Q93033 1021 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 LRRC39Q96DD0 335 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 SELENONQ9NZV5 590 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 SIT1Q9Y3P8 196 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 RIPK3Q9Y572 518 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 PCP4L1A6NKN8 68 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 C3orf70A6NLC5 250 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-202ENST00000409435 GOLGA8TH3BQL2 631 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 NDUFS3O75489 264 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 RPN2P04844 631 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 TRIM49P0CI25 452 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 TRIM49CP0CI26 452 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 RARGP13631 454 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 EPB42P16452 691 aa7.51□□□□□ -1.21
SCN9A-202ENST00000409435 MSH3P20585 1137 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms