RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 GSTA3Q16772 222 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 WDR72Q3MJ13 1102 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 MINDY4Q4G0A6 757 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ERMARDQ5T6L9 678 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 GRAMD4Q6IC98 578 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SULT6B1Q6IMI4 303 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 KLHL10Q6JEL2 608 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 TMEM154Q6P9G4 183 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SEPT14Q6ZU15 432 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ZNF589Q86UQ0 364 aaPredicted RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 RAB11FIP4Q86YS3 637 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 DNAJC10Q8IXB1 793 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLK1-202ENST00000409403 MIER2Q8N344 545 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 OR5AN1Q8NGI8 311 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ZBTB8AQ96BR9 441 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 CLIP3Q96DZ5 547 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 AGAP3Q96P47 875 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 NOX5Q96PH1 765 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SMC6Q96SB8 1091 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 FAM167BQ9BTA0 163 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 TIPINQ9BVW5 301 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ECT2Q9H8V3 914 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 RNPEPL1Q9HAU8 725 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 KCNMB3Q9NPA1 279 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 TXLNGQ9NUQ3 528 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 AATFQ9NY61 560 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLK1-202ENST00000409403 TUBA8Q9NY65 449 aaPredicted RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 RWDD2AQ9UIY3 292 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ZBTB21Q9ULJ3 1066 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ZNF148Q9UQR1 794 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 LRCH1Q9Y2L9 728 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 REXO2Q9Y3B8 237 aaKnown RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 L3MBTL1Q9Y468 752 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 COMMD3-BMI1R4GMX3 469 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 DDX60Q8IY21 1712 aaKnown RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 OTOFQ9HC10 1997 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 MAST2Q6P0Q8 1798 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 A0A0U1RQJ8 604 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 MAGEA13PA6NCF6 341 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 LGALS16A8MUM7 142 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 BIRC5O15392 142 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 NRP2O60462 931 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 PFDN1O60925 122 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 PARP1P09874 1014 aaKnown RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 FDPSP14324 419 aaKnown RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 CALB2P22676 271 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 XPAP23025 273 aaPredicted RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 AKAP5P24588 427 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 RPL13P26373 211 aaKnown RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 EEF1GP26641 437 aaKnown RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 GNALP38405 381 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 ALDH5A1P51649 535 aaPredicted RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 FKBP1BP68106 108 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 DLG4P78352 724 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 ZBED6P86452 979 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 GUCY2DQ02846 1103 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 KPNB1Q14974 876 aaKnown RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 PARP6Q2NL67 630 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 PABPC1LQ4VXU2 614 aaKnown RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 HSP90AA4PQ58FG1 418 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 RILPL1Q5EBL4 403 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 TRIM68Q6AZZ1 485 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 ANO7Q6IWH7 933 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 EPM2AIP1Q7L775 607 aaPredicted RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 PIGWQ7Z7B1 504 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 SYCP3Q8IZU3 236 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 SMYD1Q8NB12 490 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 RSPH1Q8WYR4 309 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 IRGQQ8WZA9 623 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 NDNQ99608 321 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 SLX1AQ9BQ83 275 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 CENPKQ9BS16 269 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 ACE2Q9BYF1 805 aaPredicted RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 HAPLN2Q9GZV7 340 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 ISCUQ9H1K1 167 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 UNC45AQ9H3U1 944 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 THAP9Q9H5L6 903 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 ARHGEF3Q9NR81 526 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 FAM114A2Q9NRY5 505 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 PANK4Q9NVE7 773 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 UTP6Q9NYH9 597 aaKnown RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 NDUFA13Q9P0J0 144 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 SUN2Q9UH99 717 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 EVLQ9UI08 416 aaPredicted RBP5.76□□□□□ -1.49
CLK1-202ENST00000409403 TUBD1Q9UJT1 453 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 FBXO10Q9UK96 956 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 NFU1Q9UMS0 254 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 SYNPO2Q9UMS6 1093 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 ZNF510Q9Y2H8 683 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 MGAMO43451 1857 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 MYH8P13535 1937 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 MROH7Q68CQ1 1323 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 STK36Q9NRP7 1315 aa5.76□□□□□ -1.49
CLK1-202ENST00000409403 CCDC194A0A1B0GVG4 234 aa5.75□□□□□ -1.49
CLK1-202ENST00000409403 KCNJ18B7U540 433 aa5.75□□□□□ -1.49
CLK1-202ENST00000409403 SH2B2O14492 632 aaPredicted RBP5.75□□□□□ -1.49
CLK1-202ENST00000409403 CETN3O15182 167 aa5.75□□□□□ -1.49
CLK1-202ENST00000409403 POLR2DO15514 142 aaKnown RBP5.75□□□□□ -1.49
CLK1-202ENST00000409403 CTNND1O60716 968 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms