RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TXNRD3NBQ6F5E7 133 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 PARM1Q6UWI2 310 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 TADA2BQ86TJ2 420 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 CCDC185Q8N715 623 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 RSAD2Q8WXG1 361 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 NT5C3BQ969T7 300 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 ASB16Q96NS5 453 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 NECTIN4Q96NY8 510 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 LRRC3BQ96PB8 259 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 PEBP4Q96S96 227 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 RPP25Q9BUL9 199 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 TRIM62Q9BVG3 475 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 TDP1Q9NUW8 608 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 GPATCH2LQ9NWQ4 482 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 IP6K2Q9UHH9 426 aa14.68□□□□□ -0.06
CHRNA1-204ENST00000409323 I6L893 689 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 LRCH4O75427 683 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 PALMO75781 387 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 STC2O76061 302 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 MTA2O94776 668 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 FTCDO95954 541 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 LAMP2P13473 410 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 MSNP26038 577 aaKnown RBP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 DDX6P26196 483 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 RDXP35241 583 aaKnown RBP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 TAS2R40P59535 323 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 SLC7A9P82251 487 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 TANGO2Q6ICL3 276 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 CC2D1AQ6P1N0 951 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 BEND5Q7L4P6 421 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 ARCQ7LC44 396 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 DAAM2Q86T65 1068 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 DENND1CQ8IV53 801 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 FGF14Q92915 247 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 FCRL2Q96LA5 508 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 SERPINB11Q96P15 392 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 CDK5RAP1Q96SZ6 601 aaKnown RBP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 PLA2G2FQ9BZM2 168 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 TSGA10Q9BZW7 698 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 ZWILCHQ9H900 591 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 KLHL11Q9NVR0 708 aa14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 PACSIN2Q9UNF0 486 aaPredicted RBP14.67□□□□□ -0.06
CHRNA1-204ENST00000409323 GOLGA6L7A0A1B0GV03 622 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 BTNL10A8MVZ5 291 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 TRDMT1O14717 391 aaKnown RBP14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 ZSCAN12O43309 604 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 PROSCO94903 275 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 KLKB1P03952 638 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 COMTP21964 271 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 FCARP24071 287 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 IL1R2P27930 398 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 MIPP30301 263 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 CORO1AP31146 461 aaKnown RBP14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 GBP1P32455 592 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 DNA2P51530 1060 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 VCPP55072 806 aaKnown RBP14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 GRM2Q14416 872 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 TRIP4Q15650 581 aaPredicted RBP14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 SMAD2Q15796 467 aaKnown RBP14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 ATP13A4Q4VNC1 1196 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 KCNT1Q5JUK3 1230 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 KLHDC10Q6PID8 442 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 FNIP1Q8TF40 1166 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 SMARCD2Q92925 531 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 ZFYVE19Q96K21 471 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 TKTL2Q9H0I9 626 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 RRAGDQ9NQL2 400 aaPredicted RBP14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 GDE1Q9NZC3 331 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 THEGQ9P2T0 379 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 ARHGAP26Q9UNA1 814 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 TLR6Q9Y2C9 796 aa14.66□□□□□ -0.06
CHRNA1-204ENST00000409323 MYOFQ9NZM1 2061 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 HEPACAM2A8MVW5 462 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 RNF8O76064 485 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 EIF4EBP2Q13542 120 aaPredicted RBP14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 PIGHQ14442 188 aaPredicted RBP14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 BNIPLQ7Z465 357 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 PYROXD2Q8N2H3 581 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 TXLNBQ8N3L3 684 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 ZNF276Q8N554 614 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 TDRD5Q8NAT2 981 aaKnown RBP14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 CENPIQ92674 756 aaPredicted RBP14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 SLC39A13Q96H72 371 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 SIK2Q9H0K1 926 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 WDCPQ9H6R7 721 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 SH3BP1Q9Y3L3 701 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 ALG6Q9Y672 507 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 MYO10Q9HD67 2058 aa14.65□□□□□ -0.06
CHRNA1-204ENST00000409323 SPOPO43791 374 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 IGLV3-27P01718 113 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 ASGR2P07307 311 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 MARCKSL1P49006 195 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 CXCR3P49682 368 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 COG7P83436 770 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 TCEAL1Q15170 157 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 ZNF77Q15935 545 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 CA9Q16790 459 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 TRIM68Q6AZZ1 485 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 VITQ6UXI7 678 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 CYP4V2Q6ZWL3 525 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms