RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 CHMP1AQ9HD42 196 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 C20orf96Q9NUD7 363 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 VPS28Q9UK41 221 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RNF112Q9ULX5 631 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 LRCH1Q9Y2L9 728 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 EPN1Q9Y6I3 576 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 GRIN2DO15399 1336 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 AOX1Q06278 1338 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SYNMO15061 1565 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RPS6KA4O75676 772 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 NR2F1P10589 423 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CHMP24386 653 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SRP54P61011 504 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 SF3B3Q15393 1217 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 BMT2Q1RMZ1 405 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CWF19L1Q69YN2 538 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 ZCCHC7Q8N3Z6 543 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 UBXN10Q96LJ8 280 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 ZNF558Q96NG5 402 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 FERD3LQ96RJ6 166 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SRP68Q9UHB9 627 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 SNX7Q9UNH6 387 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RPH3AQ9Y2J0 694 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 RWDD3Q9Y3V2 267 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 MYPNQ86TC9 1320 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 HOXA13P31271 388 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 EFCAB12Q6NXP0 572 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 LLGL2Q6P1M3 1020 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RHOT1Q8IXI2 618 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 EEF1AKMT1Q8WVE0 214 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 C5orf34Q96MH7 638 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 IL12RB2Q99665 862 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TRIM36Q9NQ86 728 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PHF11Q9UIL8 331 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 HPS5Q9UPZ3 1129 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 MTMR6Q9Y217 621 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3DA0A087WVF3 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3IA0A087WXS9 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3EA0A087X179 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3KA0A087X1G2 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3FA6NER0 549 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3LB9A6J9 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 F5H423 210 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 RTCAO00442 366 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 KATNA1O75449 491 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3HP0C7X1 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 DBTP11182 482 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 RIDAP52758 137 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 CASP9P55211 416 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 HECTD3Q5T447 861 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 ARMC3Q5W041 872 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3GQ6DHY5 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3CQ6IPX1 549 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 C16orf59Q7L2K0 433 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TBC1D3Q8IZP1 549 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 ATP6V1C2Q8NEY4 427 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PAIP1Q9H074 479 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 WWP1Q9H0M0 922 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PABPC3Q9H361 631 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 TASP1Q9H6P5 420 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CYLDQ9NQC7 956 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 ASAH2Q9NR71 780 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PCDHA11Q9Y5I1 949 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 ANKRD34BA5PLL1 514 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SEC24DO94855 1032 aaPredicted RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 HSD17B2P37059 387 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 BHMTQ93088 406 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PANX3Q96QZ0 392 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 GPER1Q99527 375 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SPATA5L1Q9BVQ7 753 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 ENY2Q9NPA8 101 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 POLG2Q9UHN1 485 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 PCDHGC3Q9UN70 934 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SLC12A8A0AV02 714 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 KPNA5O15131 536 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 CD3EAPO15446 510 aaKnown RBP3.48□□□□□ -1.85
NEB-204ENST00000409198 AKAP10O43572 662 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 RNF149Q8NC42 400 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 EFCAB1Q9HAE3 211 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 SAMD9Q5K651 1589 aa3.48□□□□□ -1.85
NEB-204ENST00000409198 TRIM24O15164 1050 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 FOXP2O15409 715 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 PDE9AO76083 593 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 FESP07332 822 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 TRIM27P14373 513 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 LTKP29376 864 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 HMGCS2P54868 508 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 USP4Q13107 963 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 OGFOD2Q6N063 350 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 ALDH16A1Q8IZ83 802 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 AGPAT1Q99943 283 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 SEC31BQ9NQW1 1179 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 UBQLN1Q9UMX0 589 aaKnown RBP3.47□□□□□ -1.85
NEB-204ENST00000409198 H0YGN5 161 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 USP1O94782 785 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 VBP1P61758 197 aa3.47□□□□□ -1.85
NEB-204ENST00000409198 MSLNQ13421 630 aaPredicted RBP3.47□□□□□ -1.85
NEB-204ENST00000409198 CYLC2Q14093 348 aaPredicted RBP3.47□□□□□ -1.85
NEB-204ENST00000409198 INTS11Q5TA45 600 aaKnown RBP3.47□□□□□ -1.85
NEB-204ENST00000409198 RNF25Q96BH1 459 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms