RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CEP83Q9Y592 693 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 RALGAPA1Q6GYQ0 2036 aa9.49□□□□□ -0.89
SNORD88A-201ENST00000408314 YJEFN3A6XGL0 299 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 E7ENQ6 273 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 GOLGA6L22H0YM25 854 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 IRAK2O43187 625 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 AP5Z1O43299 807 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 CAVIN2O95810 425 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 LTFP02788 710 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 TPM2P07951 284 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 HNRNPLP14866 589 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 BRD2P25440 801 aaKnown RBP9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 ERCC5P28715 1186 aaPredicted RBP9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 GNA15P30679 374 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 P2RY2P41231 377 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 ATXN1P54253 815 aaKnown RBP9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 RING1Q06587 406 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 MTA1Q13330 715 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 MAN2A1Q16706 1144 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 EXOC3L4Q17RC7 722 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 PLA2G2CQ5R387 149 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 MPP7Q5T2T1 576 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 ADGRF1Q5T601 910 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 TRIM65Q6PJ69 517 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 BEND5Q7L4P6 421 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 FAM217AQ8IXS0 508 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 WBP2Q969T9 261 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 FAM149B1Q96BN6 582 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 MED15Q96RN5 788 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 GABRG3Q99928 467 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 NUP62CLQ9H1M0 184 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 UBE2TQ9NPD8 197 aaPredicted RBP9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 ST7Q9NRC1 585 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 STOML2Q9UJZ1 356 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 FBXO10Q9UK96 956 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 AGO1Q9UL18 857 aaKnown RBP9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 DMXL1Q9Y485 3027 aa9.48□□□□□ -0.89
SNORD88A-201ENST00000408314 MYOFQ9NZM1 2061 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 BCLAF3A2AJT9 711 aaKnown RBP9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 TULP2O00295 520 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 CAPN9O14815 690 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 KHNYNO15037 678 aaKnown RBP9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 THAP12O43422 761 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 SYNCRIPO60506 623 aaKnown RBP9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 ADAM23O75077 832 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 APOEP02649 317 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 KLKB1P03952 638 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 DHPSP49366 369 aaPredicted RBP9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 RGS7P49802 495 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 BPIFB4P59827 614 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 LMAN2Q12907 356 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 EMC10Q5UCC4 262 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 FYB2Q5VWT5 728 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 EGFLAMQ63HQ2 1017 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 PMF1Q6P1K2 205 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 BHLHA9Q7RTU4 235 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 ARHGEF19Q8IW93 802 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 CEP76Q8TAP6 659 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 IPO4Q8TEX9 1081 aaKnown RBP9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 TFAP2BQ92481 460 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 EDEM1Q92611 657 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 BHMTQ93088 406 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 AZIN2Q96A70 460 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 NUSAP1Q9BXS6 441 aaKnown RBP9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 FBRSQ9HAH7 460 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 POLR3BQ9NW08 1133 aaPredicted RBP9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 TMEM51Q9NW97 253 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 PLK2Q9NYY3 685 aa9.47□□□□□ -0.89
SNORD88A-201ENST00000408314 PLXND1Q9Y4D7 1925 aa9.46□□□□□ -0.89
SNORD88A-201ENST00000408314 EML5Q05BV3 1969 aa9.46□□□□□ -0.89
SNORD88A-201ENST00000408314 DCLK1O15075 740 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 NDUFS2O75306 463 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 LETM1O95202 739 aaPredicted RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 CISD3P0C7P0 127 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 CHRM1P11229 460 aaPredicted RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 NCAM1P13591 858 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 GABRG2P18507 467 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 USP8P40818 1118 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 GPD2P43304 727 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 TBX4P57082 545 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 RPL6Q02878 288 aaKnown RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 PTK2Q05397 1052 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 MESP2Q0VG99 397 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 DAB2IPQ5VWQ8 1189 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 LYSMD4Q5XG99 296 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 RNF43Q68DV7 783 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 METTL3Q86U44 580 aaKnown RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 SYT12Q8IV01 421 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 AHI1Q8N157 1196 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 HJURPQ8NCD3 748 aaPredicted RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 MSANTD4Q8NCY6 345 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 SHC3Q92529 594 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 KAT5Q92993 513 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 TMA16Q96EY4 203 aaKnown RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 KREMEN1Q96MU8 473 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 EDEM2Q9BV94 578 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 CIPCQ9C0C6 399 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms