RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 PDZD8Q8NEN9 1154 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 BRI3BPQ8WY22 251 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 UPF1Q92900 1129 aaKnown RBP eCLIP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 EXT2Q93063 718 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 NKD2Q969F2 451 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ELMO3Q96BJ8 720 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 THOC1Q96FV9 657 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 L3MBTL3Q96JM7 780 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SPATA13Q96N96 652 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 SNRNP25Q9BV90 132 aaKnown RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 OXCT2Q9BYC2 517 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 UBXN6Q9BZV1 441 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 TASP1Q9H6P5 420 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 ZNF446Q9NWS9 450 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 LMCD1Q9NZU5 365 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 IPPQ9Y573 584 aa4.89□□□□□ -1.63
PCDH11X-207ENST00000406881 TMEM88BA6NKF7 163 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 OR6C75A6NL08 312 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GJB6O95452 261 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CST3P01034 146 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ATP5BP06576 529 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 YBX3P16989 372 aaKnown RBP eCLIP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CHRNB2P17787 502 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GP5P40197 560 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MARCKSL1P49006 195 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 FLT3LGP49771 235 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ST8SIA6P61647 398 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 EFEMP1Q12805 493 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MKRN4PQ13434 485 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 EFTUD2Q15029 972 aaKnown RBP eCLIP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TCEAL1Q15170 157 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PAN2Q504Q3 1202 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 NOMO2Q5JPE7 1267 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TMCO4Q5TGY1 634 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM171A1Q5VUB5 890 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 UGT3A1Q6NUS8 523 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TTC23LQ6PF05 361 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM43BQ6ZT52 329 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC4A11Q8NBS3 891 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CXorf38Q8TB03 319 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MDM1Q8TC05 714 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GIPC2Q8TF65 315 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ULK4Q96C45 1275 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SNX27Q96L92 541 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 UXTQ9UBK9 157 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ADAMTS5Q9UNA0 930 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 FIS1Q9Y3D6 152 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TIMM13Q9Y5L4 95 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MAST2Q6P0Q8 1798 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CFAP99D6REC4 459 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SLCO1B7G3V0H7 640 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RNF103O00237 685 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SEPT4O43236 478 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 FKTNO75072 461 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PMPCBO75439 489 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PGK1P00558 417 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MPOP05164 745 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GJB1P08034 283 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 UNGP13051 313 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PRKAR2AP13861 404 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GFAPP14136 432 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 KCNA3P22001 575 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 EDNRBP24530 442 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 HTR7P34969 479 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SCNN1AP37088 669 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PTPN9P43378 593 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RAD23BP54727 409 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CORO7P57737 925 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TAS2R40P59535 323 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ABCE1P61221 599 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RPL7AP62424 266 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MRPS5P82675 430 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 KIF19Q2TAC6 998 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 BRMS1LQ5PSV4 323 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GRTP1Q5TC63 336 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MROH9Q5TGP6 573 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MARC1Q5VT66 337 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 AGAP9Q5VTM2 703 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC26A9Q7LBE3 791 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 IQCKQ8N0W5 287 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RSPH1Q8WYR4 309 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 IRGQQ8WZA9 623 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 DCUN1D1Q96GG9 259 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GBP5Q96PP8 586 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 LBHD1Q9BQE6 289 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 NRDE2Q9H7Z3 1164 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 NPHS2Q9NP85 383 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RBM22Q9NW64 420 aaKnown RBP eCLIP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 VANGL2Q9ULK5 521 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 G3BP2Q9UN86 482 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SF3B1O75533 1304 aaKnown RBP eCLIP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 STX7O15400 261 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CA12O43570 354 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CRTAMO95727 393 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 AMHP03971 560 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RHOCP08134 193 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms