RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TSHZ1Q6ZSZ6 1077 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 CMC1Q7Z7K0 106 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 SPNS2Q8IVW8 549 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 TP53INP2Q8IXH6 220 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 AZIN2Q96A70 460 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 ZNF778Q96MU6 729 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 VCXQ9H320 206 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 KCNK4Q9NYG8 393 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 GGA3Q9NZ52 723 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 WDR35Q9P2L0 1181 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 ADAMTS5Q9UNA0 930 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 TXNDC9O14530 226 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 NDC80O14777 642 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 HNRNPCL1O60812 293 aaKnown RBP12.38□□□□□ -0.43
RBM39-206ENST00000403542 BPGMP07738 259 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 SAT1P21673 171 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 MLH1P40692 756 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 RABGGTBP53611 331 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 KRT72Q14CN4 511 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 SLC10A6Q3KNW5 377 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 TEX44Q53QW1 395 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 LGSNQ5TDP6 509 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 OR52E8Q6IFG1 317 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 ZNF534Q76KX8 674 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 FAM131BQ86XD5 332 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 TUBGCP5Q96RT8 1024 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 GPR20Q99678 358 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
RBM39-206ENST00000403542 TUBB6Q9BUF5 446 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 BCO2Q9BYV7 579 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 PTPRHQ9HD43 1115 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 NDE1Q9NXR1 346 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 TAGLN3Q9UI15 199 aa12.38□□□□□ -0.43
RBM39-206ENST00000403542 GOLGA8TH3BQL2 631 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 ADCY6O43306 1168 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 PFKMP08237 780 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 ERVK-10P10266 1014 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 PAPOLAP51003 745 aaKnown RBP12.37□□□□□ -0.43
RBM39-206ENST00000403542 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 USP4Q13107 963 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 IRGCQ6NXR0 463 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 TTC30AQ86WT1 665 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 C10orf107Q8IVU9 208 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.37□□□□□ -0.43
RBM39-206ENST00000403542 CCNYQ8ND76 341 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 A0A1B0GVG6 124 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 GOT1P17174 413 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 MGAT1P26572 445 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 SERPINB6P35237 376 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 OAZ1P54368 228 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 HDAC4P56524 1084 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 BIRC2Q13490 618 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 C6orf163Q5TEZ5 329 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 DEFB132Q7Z7B7 95 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 SESTD1Q86VW0 696 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 ARHGAP24Q8N264 748 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 CCDC185Q8N715 623 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 UNKQ9C0B0 810 aaKnown RBP12.37□□□□□ -0.43
RBM39-206ENST00000403542 EBF3Q9H4W6 596 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 NRDE2Q9H7Z3 1164 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
RBM39-206ENST00000403542 E9PBE3 544 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 NFKBIEO00221 500 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 PAPSS1O43252 624 aaPredicted RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 KLHL41O60662 606 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 TM7SF2O76062 418 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 NPTXRO95502 500 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ALDOAP04075 364 aaKnown RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 CCDC130P13994 396 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ARRB2P32121 409 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ICAM3P32942 547 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 TMEM132DQ14C87 1099 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 GSDMBQ8TAX9 411 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 KLRG1Q96E93 195 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 EBNA1BP2Q99848 306 aaKnown RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 LAMA3Q16787 3333 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 GOLGA8QA0A0J9YX86 632 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 GOLGA8OA6NCC3 632 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 A6NJR5 290 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 GOLGA8NF8WBI6 632 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 GABBR2O75899 941 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 VDRP11473 427 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ITGA9Q13797 1035 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 SURF1Q15526 300 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 HEATR6Q6AI08 1181 aaKnown RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 HPS6Q86YV9 775 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 PHTF2Q8N3S3 785 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 RNF148Q8N7C7 305 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 DNERQ8NFT8 737 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 OR6B3Q8NGW1 331 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 NLRP7Q8WX94 980 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 FAM149B1Q96BN6 582 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 C7orf26Q96N11 449 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms