RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CLUHO75153 1309 aa12.71□□□□□ -0.37
CLIP4-203ENST00000401617 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 ENPP3O14638 875 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 CAPN9O14815 690 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 F9P00740 461 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 ATP5DP30049 168 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 HCAR3P49019 387 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 CXCR3P49682 368 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 HNRNPH2P55795 449 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 GPX6P59796 221 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 BASP1P80723 227 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 YWHAHQ04917 246 aaPredicted RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 RNASELQ05823 741 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 BFSP2Q13515 415 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 EIF4EBP2Q13542 120 aaPredicted RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 KCNT2Q6UVM3 1135 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 BZW1Q7L1Q6 419 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 TAOK1Q7L7X3 1001 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 CCDC13Q8IYE1 715 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 SLC7A14Q8TBB6 771 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 MAML1Q92585 1016 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 PPCSQ9HAB8 311 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 ANLNQ9NQW6 1124 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 TMPRSS4Q9NRS4 437 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 FETUBQ9UGM5 382 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 GOLGA8MH3BSY2 632 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 I6L893 689 aaPredicted RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 TNFRSF10BO14763 440 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 DCLK1O15075 740 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 IGLV3-25P01717 112 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 NCAM1P13591 858 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 NME3Q13232 169 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 EFHC2Q5JST6 749 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 BSPRYQ5W0U4 402 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 CTU1Q7Z7A3 348 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 PDIK1LQ8N165 341 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 BCAS4Q8TDM0 211 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 ARHGEF2Q92974 986 aaKnown RBP12.7□□□□□ -0.38
CLIP4-203ENST00000401617 ZCWPW1Q9H0M4 648 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 CTNNAL1Q9UBT7 734 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 MFHAS1Q9Y4C4 1052 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 ACTL7BQ9Y614 415 aa12.7□□□□□ -0.38
CLIP4-203ENST00000401617 NUP205Q92621 2012 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 PLXNA3P51805 1871 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 BRCA2P51587 3418 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 TRAPPC3O43617 180 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 BANF1O75531 89 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 MAP3K6O95382 1288 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 ZNF135P52742 658 aaPredicted RBP12.69□□□□□ -0.38
CLIP4-203ENST00000401617 PPP1R21Q6ZMI0 780 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 CRIPAKQ8N1N5 446 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 MDM1Q8TC05 714 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 COLEC11Q9BWP8 271 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 PAK6Q9NQU5 681 aaPredicted RBP12.69□□□□□ -0.38
CLIP4-203ENST00000401617 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 SCN5AQ14524 2016 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 SYN3O14994 580 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 MFSD11O43934 449 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 AMHP03971 560 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 PRKD1Q15139 912 aaPredicted RBP12.69□□□□□ -0.38
CLIP4-203ENST00000401617 HP1BP3Q5SSJ5 553 aaPredicted RBP12.69□□□□□ -0.38
CLIP4-203ENST00000401617 FOXR1Q6PIV2 292 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 RFX8Q6ZV50 586 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 ATP11CQ8NB49 1132 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 MCUQ8NE86 351 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 DBF4BQ8NFT6 615 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 ADAM32Q8TC27 787 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 PYROXD1Q8WU10 500 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 ATXN2LQ8WWM7 1075 aaKnown RBP12.69□□□□□ -0.38
CLIP4-203ENST00000401617 TRIM62Q9BVG3 475 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 UNC93B1Q9H1C4 597 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 ETNK1Q9HBU6 452 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 DDIT4Q9NX09 232 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 DNAJB4Q9UDY4 337 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 RABGEF1Q9UJ41 708 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 PRDM4Q9UKN5 801 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 TEX264Q9Y6I9 313 aa12.69□□□□□ -0.38
CLIP4-203ENST00000401617 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 FNDC1Q4ZHG4 1894 aaPredicted RBP12.68□□□□□ -0.38
CLIP4-203ENST00000401617 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 EXOC1LA0A1B0GW35 172 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 FAM72CH0Y354 149 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 EEF2KO00418 725 aaKnown RBP12.68□□□□□ -0.38
CLIP4-203ENST00000401617 VAV1P15498 845 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 CHN1P15882 459 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 OR1G1P47890 313 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 GLUD2P49448 558 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 MRPL58Q14197 206 aaKnown RBP12.68□□□□□ -0.38
CLIP4-203ENST00000401617 CCDC38Q502W7 563 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 FAM72AQ5TYM5 149 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 FAM72DQ6L9T8 149 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 FAM72BQ86X60 149 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms