RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 A0A1W2PQF6 199 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 FBXO21O94952 628 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 IGLV3-27P01718 113 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 BCKDHBP21953 392 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 GNA15P30679 374 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 WASP42768 502 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 CCDC6Q16204 474 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 MEA1Q16626 185 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 VWA3BQ502W6 1294 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 USP39Q53GS9 565 aaKnown RBP16.55■□□□□ 0.24
ATG4B-203ENST00000400772 HSP90AA4PQ58FG1 418 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 PRR23CQ6ZRP0 262 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
ATG4B-203ENST00000400772 WDTC1Q8N5D0 677 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 FRMD1Q8N878 549 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 STK32AQ8WU08 396 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 PIWIL1Q96J94 861 aaKnown RBP16.55■□□□□ 0.24
ATG4B-203ENST00000400772 NDST4Q9H3R1 872 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 SAMSN1Q9NSI8 373 aaKnown RBP16.55■□□□□ 0.24
ATG4B-203ENST00000400772 DACH1Q9UI36 760 aa16.55■□□□□ 0.24
ATG4B-203ENST00000400772 TCRBV21S2A2A0A5A6 115 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 PRR5-ARHGAP8B1AHC4 643 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 THAP12O43422 761 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 MED7O43513 233 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 ALDH1A2O94788 518 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 NTSR1P30989 418 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 HARS2P49590 506 aaKnown RBP16.54■□□□□ 0.24
ATG4B-203ENST00000400772 ARHGAP8P85298 464 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 LMNB2Q03252 620 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 PUM1Q14671 1186 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATG4B-203ENST00000400772 GEN1Q17RS7 908 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 CT47A1Q5JQC4 288 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-203ENST00000400772 PLA2G2CQ5R387 149 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 KIAA1211LQ6NV74 962 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 RBM43Q6ZSC3 357 aaKnown RBP16.54■□□□□ 0.24
ATG4B-203ENST00000400772 TMEM110Q86TL2 294 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 FAM114A1Q8IWE2 563 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 DDI1Q8WTU0 396 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 HMGB4Q8WW32 186 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 RLN3Q8WXF3 142 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 GABRG3Q99928 467 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 TUBGCP2Q9BSJ2 902 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 ST7Q9NRC1 585 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 DNAJC12Q9UKB3 198 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
ATG4B-203ENST00000400772 RALGAPA1Q6GYQ0 2036 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 CEP250Q9BV73 2442 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 WASH3PC4AMC7 463 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 FOXN3O00409 490 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-203ENST00000400772 PAPSS1O43252 624 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-203ENST00000400772 TSPAN3O60637 253 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 RHOBTB1O94844 696 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 LATS1O95835 1130 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 PRKCSHP14314 528 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-203ENST00000400772 HOXB2P14652 356 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 GABRG2P18507 467 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 USP8P40818 1118 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 P2RY2P41231 377 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 ACADSBP45954 432 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 ATXN1P54253 815 aaKnown RBP16.53■□□□□ 0.24
ATG4B-203ENST00000400772 MAP7D1Q3KQU3 841 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 ADGRF1Q5T601 910 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 TMEM215Q68D42 235 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 CHPFQ8IZ52 775 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 SMOC1Q9H4F8 434 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 TJP2Q9UDY2 1190 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 MBD1Q9UIS9 605 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-203ENST00000400772 PCDHGA5Q9Y5G8 931 aa16.53■□□□□ 0.24
ATG4B-203ENST00000400772 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 KCNJ18B7U540 433 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 E5RJQ4 531 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 GDF9O60383 454 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 CYBBP04839 570 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 ZNF806P0C7X5 589 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 NCAM1P13591 858 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-203ENST00000400772 GBP1P32455 592 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 CLCN1P35523 988 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 SGSHP51688 502 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 KCNJ12Q14500 433 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 SF3A2Q15428 464 aaKnown RBP16.52■□□□□ 0.24
ATG4B-203ENST00000400772 MPPE1Q53F39 396 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 SYPL2Q5VXT5 272 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 PMS2CLQ68D20 193 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 SMYD5Q6GMV2 418 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 ERMP1Q7Z2K6 904 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 DQX1Q8TE96 717 aaKnown RBP16.52■□□□□ 0.24
ATG4B-203ENST00000400772 IPO4Q8TEX9 1081 aaKnown RBP16.52■□□□□ 0.24
ATG4B-203ENST00000400772 GOLGA1Q92805 767 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 FCRL2Q96LA5 508 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-203ENST00000400772 CACNA2D2Q9NY47 1150 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 BCCIPQ9P287 314 aaKnown RBP eCLIP16.52■□□□□ 0.24
ATG4B-203ENST00000400772 PCDHGC3Q9UN70 934 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 RAD54BQ9Y620 910 aa16.52■□□□□ 0.24
ATG4B-203ENST00000400772 PNMA6AP0CW24 399 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-203ENST00000400772 SLC6A4P31645 630 aa16.51■□□□□ 0.23
ATG4B-203ENST00000400772 MPLP40238 635 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms