RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.71■□□□□ 0.11
COL25A1-201ENST00000399126 ADAM28Q9UKQ2 775 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 TMEM189-UBE2V1I3L0A0 370 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 LTFP02788 710 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 GOT1P17174 413 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 DESP17661 470 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 NOMO1Q15155 1222 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 SPATA2LQ8IUW3 424 aaPredicted RBP15.71■□□□□ 0.11
COL25A1-201ENST00000399126 MAP7D3Q8IWC1 876 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 BCL7CQ8WUZ0 217 aaPredicted RBP15.71■□□□□ 0.11
COL25A1-201ENST00000399126 CRISPLD2Q9H0B8 497 aa15.71■□□□□ 0.11
COL25A1-201ENST00000399126 MYO16Q9Y6X6 1858 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 OAZ2O95190 189 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 GBP1P32455 592 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 GBE1Q04446 702 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 GAD2Q05329 585 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 AP1ARQ63HQ0 302 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 P3H4Q92791 437 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 SEZ6LQ9BYH1 1024 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 FZD10Q9ULW2 581 aa15.71■□□□□ 0.1
COL25A1-201ENST00000399126 DCDC2CA8MYV0 355 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 FBXO21O94952 628 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 GRIK1P39086 918 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 PPARDQ03181 441 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 LMNB2Q03252 620 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 DEUP1Q05D60 604 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 SLC29A2Q14542 456 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 SCN4BQ8IWT1 228 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 TTC13Q8NBP0 860 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 FAF2Q96CS3 445 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 ZNF333Q96JL9 665 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 CSPG4P5Q96PW8 444 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 ZNF670Q9BS34 389 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 FAM107BQ9H098 131 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 PABPC3Q9H361 631 aaKnown RBP15.7■□□□□ 0.1
COL25A1-201ENST00000399126 CENPHQ9H3R5 247 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 APOL1O14791 398 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 MCF2LO15068 1137 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 SOAT2O75908 522 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 CXCL10P02778 98 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 COL6A1P12109 1028 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 AMPD1P23109 780 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 RDXP35241 583 aaKnown RBP15.7■□□□□ 0.1
COL25A1-201ENST00000399126 SLC5A3P53794 718 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 ARPP19P56211 112 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 SLC10A2Q12908 348 aaPredicted RBP15.7■□□□□ 0.1
COL25A1-201ENST00000399126 MTMR3Q13615 1198 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 TFDP2Q14188 446 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 SLC9A4Q6AI14 798 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 HIBCHQ6NVY1 386 aaPredicted RBP15.7■□□□□ 0.1
COL25A1-201ENST00000399126 RSPO2Q6UXX9 243 aaPredicted RBP15.7■□□□□ 0.1
COL25A1-201ENST00000399126 TAS1R1Q7RTX1 841 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 NPAS4Q8IUM7 802 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 GPR152Q8TDT2 470 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 ZCWPW1Q9H0M4 648 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 CDC42EP4Q9H3Q1 356 aaKnown RBP15.7■□□□□ 0.1
COL25A1-201ENST00000399126 WDR6Q9NNW5 1121 aaKnown RBP15.7■□□□□ 0.1
COL25A1-201ENST00000399126 STAP1Q9ULZ2 295 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 NR2E3Q9Y5X4 410 aa15.7■□□□□ 0.1
COL25A1-201ENST00000399126 MYO18AQ92614 2054 aaKnown RBP15.69■□□□□ 0.1
COL25A1-201ENST00000399126 FAM72CH0Y354 149 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 DNALI1O14645 258 aaPredicted RBP15.69■□□□□ 0.1
COL25A1-201ENST00000399126 MTM1Q13496 603 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 DDR2Q16832 855 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 SYCP2LQ5T4T6 812 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 FAM72AQ5TYM5 149 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 BSPRYQ5W0U4 402 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 FAM72DQ6L9T8 149 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 FAM72BQ86X60 149 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 ATAD1Q8NBU5 361 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 APBB2Q92870 758 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 PCDH9Q9HC56 1237 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 DDIT4Q9NX09 232 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 NUDT5Q9UKK9 219 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 SNX10Q9Y5X0 201 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 USP3Q9Y6I4 520 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 CDH23Q9H251 3354 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 GOLGA8MH3BSY2 632 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 OPA1O60313 960 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 ITGB8P26012 769 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 ELF1P32519 619 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 RPL22P35268 128 aaKnown RBP15.69■□□□□ 0.1
COL25A1-201ENST00000399126 SKIDA1Q1XH10 827 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 RTP2Q5QGT7 225 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 HP1BP3Q5SSJ5 553 aaPredicted RBP15.69■□□□□ 0.1
COL25A1-201ENST00000399126 ANKRD22Q5VYY1 191 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 PM20D1Q6GTS8 502 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 DARS2Q6PI48 645 aaKnown RBP15.69■□□□□ 0.1
COL25A1-201ENST00000399126 RSAD2Q8WXG1 361 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 TBX21Q9UL17 535 aa15.69■□□□□ 0.1
COL25A1-201ENST00000399126 H7C0C1 242 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 TNFRSF10BO14763 440 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 ACSL3O95573 720 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 ALDH2P05091 517 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 GALTP07902 379 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 RARGP13631 454 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 ATP5OP48047 213 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 ROR1Q01973 937 aa15.68■□□□□ 0.1
COL25A1-201ENST00000399126 MAPRE1Q15691 268 aaKnown RBP15.68■□□□□ 0.1
COL25A1-201ENST00000399126 CTXN3Q4LDR2 81 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms