RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 LINGO3P0C6S8 592 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 RAP1GDS1P52306 607 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 GBE1Q04446 702 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 KYAT1Q16773 422 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 TMEM110Q86TL2 294 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 PDCD7Q8N8D1 485 aaKnown RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 LBHD1Q9BQE6 289 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 C20orf27Q9GZN8 174 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 STX18Q9P2W9 335 aaKnown RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 MARCOQ9UEW3 520 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 PCDHA11Q9Y5I1 949 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 MCM3APO60318 1980 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 A8MXQ7 604 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 H3BRJ5 948 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 MAGEC1O60732 1142 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 TFE3P19532 575 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 AQP5P55064 265 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 SLC10A2Q12908 348 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 TMPRSS6Q8IU80 811 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 CRLF3Q8IUI8 442 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 FBXO27Q8NI29 283 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 PDGFCQ9NRA1 345 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 BIRC5O15392 142 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 GABBR2O75899 941 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 KITP10721 976 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 SERPINB9P50453 376 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 GTF2A2P52657 109 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 ZNF484Q5JVG2 852 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 LRRC74BQ6ZQY2 392 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 ACOT1Q86TX2 421 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 SESTD1Q86VW0 696 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 STKLD1Q8NE28 680 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 SLC35F5Q8WV83 523 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 AFG1LQ8WV93 481 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 FAM136AQ96C01 138 aa26.43■■□□□ 1.82
COL13A1-203ENST00000398969 MRPL45Q9BRJ2 306 aaKnown RBP26.43■■□□□ 1.82
COL13A1-203ENST00000398969 HBS1LQ9Y450 684 aaKnown RBP26.43■■□□□ 1.82
COL13A1-203ENST00000398969 CCL15-CCL14A0A0B4J2E2 113 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 BTBD19C9JJ37 291 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 DESP17661 470 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 L1CAMP32004 1257 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 GRIA1P42261 906 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 THOC5Q13769 683 aaKnown RBP26.42■■□□□ 1.82
COL13A1-203ENST00000398969 CCL15Q16663 113 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 LINC01465Q8N7H1 131 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 DTX3LQ8TDB6 740 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 B3GNT5Q9BYG0 378 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 FAM49BQ9NUQ9 324 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 AKT3Q9Y243 479 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 SLC45A1Q9Y2W3 748 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.42■■□□□ 1.82
COL13A1-203ENST00000398969 VTNP04004 478 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 SETSIPP0DME0 302 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 KLC1Q07866 573 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 DPYSL2Q16555 572 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 RBM15BQ8NDT2 890 aaKnown RBP26.42■■□□□ 1.82
COL13A1-203ENST00000398969 DEPDC1BQ8WUY9 529 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 SCG3Q8WXD2 468 aaKnown RBP26.42■■□□□ 1.82
COL13A1-203ENST00000398969 KIF12Q96FN5 646 aa26.42■■□□□ 1.82
COL13A1-203ENST00000398969 XAB2Q9HCS7 855 aaKnown RBP26.42■■□□□ 1.82
COL13A1-203ENST00000398969 DPPA5A6NC42 116 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 TOP3BO95985 862 aaKnown RBP26.41■■□□□ 1.82
COL13A1-203ENST00000398969 CCNA1P78396 465 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 MDH1BQ5I0G3 518 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 ADGRF2Q8IZF7 708 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 CCDC33Q8N5R6 958 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 FAM161BQ96MY7 647 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 TAGLN3Q9UI15 199 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 ASB14A6NK59 587 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 AMPD1P23109 780 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 FKBP1BP68106 108 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 KCNT2Q6UVM3 1135 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 TIFABQ6ZNK6 161 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 BRI3BPQ8WY22 251 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 QKIQ96PU8 341 aaKnown RBP eCLIP26.41■■□□□ 1.82
COL13A1-203ENST00000398969 CCDC106Q9BWC9 280 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 DHX35Q9H5Z1 703 aaKnown RBP26.41■■□□□ 1.82
COL13A1-203ENST00000398969 MOCS1Q9NZB8 636 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 HESX1Q9UBX0 185 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 PLA2G4CQ9UP65 541 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 LRCH1Q9Y2L9 728 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 NME7Q9Y5B8 376 aa26.41■■□□□ 1.82
COL13A1-203ENST00000398969 SEMA5AQ13591 1074 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 RCN2Q14257 317 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 NT5DC4Q86YG4 428 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 MAGEB5Q9BZ81 275 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 NR2C2P49116 596 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 ATXN1P54253 815 aaKnown RBP26.4■■□□□ 1.82
COL13A1-203ENST00000398969 STX3Q13277 289 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 TTLL4Q14679 1199 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 NBPF20Q3BBV1 942 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 ZCCHC23Q6ZST2 131 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 ARCQ7LC44 396 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 C11orf84Q9BUA3 381 aaPredicted RBP26.4■■□□□ 1.82
COL13A1-203ENST00000398969 SLC24A3Q9HC58 644 aa26.4■■□□□ 1.82
COL13A1-203ENST00000398969 A6NJR5 290 aa26.39■■□□□ 1.82
COL13A1-203ENST00000398969 TSPAN1O60635 241 aa26.39■■□□□ 1.82
COL13A1-203ENST00000398969 TOMM70O94826 608 aa26.39■■□□□ 1.82
COL13A1-203ENST00000398969 ZFXP17010 805 aaPredicted RBP26.39■■□□□ 1.82
COL13A1-203ENST00000398969 PTPN9P43378 593 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms