RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 C6orf163Q5TEZ5 329 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 KCNT2Q6UVM3 1135 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 CCDC33Q8N5R6 958 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 DTX3LQ8TDB6 740 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 SLC35F5Q8WV83 523 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 WDR60Q8WVS4 1066 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
PRAME-201ENST00000398741 B3GNT5Q9BYG0 378 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 ARHGEF4Q9NR80 690 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 HBS1LQ9Y450 684 aaKnown RBP13.54□□□□□ -0.24
PRAME-201ENST00000398741 MAGEC1O60732 1142 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 CNTFP26441 200 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 ALDH18A1P54886 795 aaKnown RBP13.54□□□□□ -0.24
PRAME-201ENST00000398741 MXRA7P84157 204 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 CDK18Q07002 472 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 KLC1Q07866 573 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 TBCCQ15814 346 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 Q3C1V9 767 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 CASC4Q6P4E1 433 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 LRRC74BQ6ZQY2 392 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 ARCQ7LC44 396 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 OR6B3Q8NGW1 331 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 KHSRPQ92945 711 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRAME-201ENST00000398741 QKIQ96PU8 341 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRAME-201ENST00000398741 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
PRAME-201ENST00000398741 TAGLN3Q9UI15 199 aa13.54□□□□□ -0.24
PRAME-201ENST00000398741 CAPN14A8MX76 684 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 SNNO75324 88 aaPredicted RBP13.53□□□□□ -0.24
PRAME-201ENST00000398741 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
PRAME-201ENST00000398741 SKIP12755 728 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 TFE3P19532 575 aaPredicted RBP13.53□□□□□ -0.24
PRAME-201ENST00000398741 PTPN9P43378 593 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 IRX4P78413 519 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 KDSRQ06136 332 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 SLC10A2Q12908 348 aaPredicted RBP13.53□□□□□ -0.24
PRAME-201ENST00000398741 SEMA5AQ13591 1074 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 LAMC2Q13753 1193 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 DENND5BQ6ZUT9 1274 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 TREML1Q86YW5 311 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 LINC01465Q8N7H1 131 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 C7orf31Q8N865 590 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 SCG3Q8WXD2 468 aaKnown RBP13.53□□□□□ -0.24
PRAME-201ENST00000398741 CDKL2Q92772 493 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 THAP1Q9NVV9 213 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 STX18Q9P2W9 335 aaKnown RBP13.53□□□□□ -0.24
PRAME-201ENST00000398741 RBPJLQ9UBG7 517 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 MGAMO43451 1857 aa13.53□□□□□ -0.24
PRAME-201ENST00000398741 A6NHS1 94 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 ASB14A6NK59 587 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 TBX10O75333 385 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 GRM5P41594 1212 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 GRIA1P42261 906 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 IREB2P48200 963 aaKnown RBP13.52□□□□□ -0.24
PRAME-201ENST00000398741 RAP1GDS1P52306 607 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.24
PRAME-201ENST00000398741 ARHGAP1Q07960 439 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 WASHC5Q12768 1159 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 DNAL1Q4LDG9 190 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 GJC2Q5T442 439 aaPredicted RBP13.52□□□□□ -0.24
PRAME-201ENST00000398741 CES4AQ5XG92 561 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 KYAT3Q6YP21 454 aaKnown RBP13.52□□□□□ -0.24
PRAME-201ENST00000398741 TIFABQ6ZNK6 161 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 ZCCHC23Q6ZST2 131 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 RFX8Q6ZV50 586 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 RBM15BQ8NDT2 890 aaKnown RBP13.52□□□□□ -0.24
PRAME-201ENST00000398741 CSPG4P5Q96PW8 444 aa13.52□□□□□ -0.24
PRAME-201ENST00000398741 KCTD15Q96SI1 283 aaPredicted RBP13.52□□□□□ -0.24
PRAME-201ENST00000398741 WDR27A2RRH5 827 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 HMX2A2RU54 273 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 F5H423 210 aaPredicted RBP13.52□□□□□ -0.25
PRAME-201ENST00000398741 LCP1P13796 627 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 FDFT1P37268 417 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 HSF5Q4G112 596 aaPredicted RBP13.52□□□□□ -0.25
PRAME-201ENST00000398741 FASTKD1Q53R41 847 aaKnown RBP13.52□□□□□ -0.25
PRAME-201ENST00000398741 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 WDR75Q8IWA0 830 aaKnown RBP13.52□□□□□ -0.25
PRAME-201ENST00000398741 SCUBE1Q8IWY4 988 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 CLEC4CQ8WTT0 213 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 TFB1MQ8WVM0 346 aaKnown RBP13.52□□□□□ -0.25
PRAME-201ENST00000398741 HTR3CQ8WXA8 447 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 ATP2A3Q93084 1043 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 MROH8Q9H579 483 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 ZNF212Q9UDV6 495 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 LRCH1Q9Y2L9 728 aa13.52□□□□□ -0.25
PRAME-201ENST00000398741 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.52□□□□□ -0.25
PRAME-201ENST00000398741 PPEF2O14830 753 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 MAP3K7O43318 606 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 STK10O94804 968 aaKnown RBP13.51□□□□□ -0.25
PRAME-201ENST00000398741 NPTXRO95502 500 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 TOP3BO95985 862 aaKnown RBP13.51□□□□□ -0.25
PRAME-201ENST00000398741 SERPINA6P08185 405 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 ZNF286BP0CG31 522 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 ADORA2BP29275 332 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 ARL4AP40617 200 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 DBN1Q16643 649 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 DCAF4L1Q3SXM0 396 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 MTHFD1LQ6UB35 978 aa13.51□□□□□ -0.25
PRAME-201ENST00000398741 ARMCX2Q7L311 632 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms