RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RAB30Q15771 203 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 DNAJB7Q7Z6W7 309 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 KREMEN2Q8NCW0 462 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 SLC39A13Q96H72 371 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 RNF157Q96PX1 679 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 KCTD15Q96SI1 283 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 CDK5RAP1Q96SZ6 601 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 LRRC1Q9BTT6 524 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 CALN1Q9BXU9 219 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 DHX35Q9H5Z1 703 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 PCYOX1Q9UHG3 505 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 TLR6Q9Y2C9 796 aa20.23■□□□□ 0.83
PDLIM2-205ENST00000397761 SYNJ2BP-COX16A0A087WUM0 186 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 A0A1W2PPC1 479 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 ZNF840PA6NDX5 716 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 CA8P35219 290 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 IRS1P35568 1242 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 FNTAP49354 379 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 TUBP50607 506 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 MMRN1Q13201 1228 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 GPM6BQ13491 265 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 CCNG2Q16589 344 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 ARL13BQ3SXY8 428 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 ANKRD20A8PQ5CZ79 823 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 EFHC2Q5JST6 749 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 C8orf74Q6P047 294 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 DRICH1Q6PGQ1 229 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 KLHDC10Q6PID8 442 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 ITIH5Q86UX2 942 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 KLHL7Q8IXQ5 586 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 DCLK3Q9C098 648 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 WDCPQ9H6R7 721 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 PRDM16Q9HAZ2 1276 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 COX16Q9P0S2 106 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 UXTQ9UBK9 157 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 SFMBT1Q9UHJ3 866 aa20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 R3HDM2Q9Y2K5 976 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-205ENST00000397761 NUP205Q92621 2012 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 KCNU1A8MYU2 1149 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 IGLV3-27P01718 113 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 SPATA31D3P0C874 917 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 ZNF135P52742 658 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 TFDP2Q14188 446 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 SLC9A4Q6AI14 798 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 TTC27Q6P3X3 843 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 SPATA31D4Q6ZUB0 917 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 PQLC3Q8N755 202 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 PCDH19Q8TAB3 1148 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 SLCO2A1Q92959 643 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 MAGOHBQ96A72 148 aaKnown RBP20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 MAGEB5Q9BZ81 275 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 OSBPL2Q9H1P3 480 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 TMPRSS4Q9NRS4 437 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 NUDT5Q9UKK9 219 aa20.21■□□□□ 0.83
PDLIM2-205ENST00000397761 BHMG1C9JSJ3 638 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 MSI1O43347 362 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 TLR5O60602 858 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 CST8O60676 142 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 LPXNO60711 386 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 C8AP07357 584 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 RHOXF2BP0C7M4 288 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 CCR1P32246 355 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 COILP38432 576 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 HCAR3P49019 387 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 TRIP4Q15650 581 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 PPP6R3Q5H9R7 873 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 KAZNQ674X7 775 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 CCDC70Q6NSX1 233 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 TMEM150AQ86TG1 271 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 PYROXD2Q8N2H3 581 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 SLC22A17Q8WUG5 538 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 RUBCNQ92622 972 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 FCRL2Q96LA5 508 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 ZNF512Q96ME7 567 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 RUNDC3BQ96NL0 473 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 CSPG4P5Q96PW8 444 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 HAPLN3Q96S86 360 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 RHOXF2Q9BQY4 288 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 LRRC3Q9BY71 257 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 FRMD8P1Q9BZ68 369 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 TKTL2Q9H0I9 626 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 LMAN2LQ9H0V9 348 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 CCSER2Q9H7U1 834 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 IL21Q9HBE4 155 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 TRPM5Q9NZQ8 1165 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 CWC15Q9P013 229 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 MARCH2Q9P0N8 246 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 MSRAQ9UJ68 235 aa20.2■□□□□ 0.82
PDLIM2-205ENST00000397761 APOC4-APOC2K7ER74 178 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 DYNC1I1O14576 645 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 RAD51CO43502 376 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 SLC34A2O95436 690 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 APOC2P02655 101 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 F11P03951 625 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 SLC2A3P11169 496 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 RING1Q06587 406 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 EFEMP1Q12805 493 aa20.19■□□□□ 0.82
PDLIM2-205ENST00000397761 DHX34Q14147 1143 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms