RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 KRT1P04264 644 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 NUDT17P0C025 328 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 DNAJB1P25685 340 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 ATXN1P54253 815 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 UBE3AQ05086 875 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 DHX9Q08211 1270 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 ODF2Q5BJF6 829 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 KCNT1Q5JUK3 1230 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 BTBD8Q5XKL5 378 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 BEND5Q7L4P6 421 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 SCD5Q86SK9 330 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 MON1AQ86VX9 555 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 RCOR2Q8IZ40 523 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 SLC7A14Q8TBB6 771 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 FBXO32Q969P5 355 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 RNF25Q96BH1 459 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 ACSF2Q96CM8 615 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 TGS1Q96RS0 853 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 TLR9Q9NR96 1032 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 ABCC13Q9NSE7 274 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 ZDHHC18Q9NUE0 388 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 TMEM51Q9NW97 253 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 RRN3Q9NYV6 651 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 MAFFQ9ULX9 164 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 YBX2Q9Y2T7 364 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 A0A1W2PQH9 124 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 FAM92AA1XBS5 289 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 PI4K2BG5E9Z4 385 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 M0QYT0 321 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 PRRG1O14668 218 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 ALDH1A3P47895 512 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 PGFP49763 221 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 CYP1B1Q16678 543 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 OTUD1Q5VV17 481 aaPredicted RBP20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 PLPP4Q5VZY2 271 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 HOOK3Q86VS8 718 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 CCDC50Q8IVM0 306 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 RBM41Q96IZ5 413 aaKnown RBP20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 KLHL5Q96PQ7 755 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 EMILIN2Q9BXX0 1053 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 CNOT10Q9H9A5 744 aaKnown RBP20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 NMUR1Q9HB89 426 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 GMIPQ9P107 970 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 SLC12A6Q9UHW9 1150 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 YIPF1Q9Y548 306 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 IRAK3Q9Y616 596 aa20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 LAMA2P24043 3122 aaKnown RBP20.08■□□□□ 0.8
PDLIM2-204ENST00000397760 SYNJ2BP-COX16A0A087WUM0 186 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 ENDOD1O94919 500 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 RARAP10276 462 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 GUCY1A3Q02108 690 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 DEUP1Q05D60 604 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 BOLA3Q53S33 107 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 CYP4V2Q6ZWL3 525 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 BNIPLQ7Z465 357 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 JAMLQ86YT9 394 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 TCEAL8Q8IYN2 117 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 ARHGAP18Q8N392 663 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 MRPL43Q8N983 215 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 RAPGEF5Q92565 580 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 HSPH1Q92598 858 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 SAMD11Q96NU1 681 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 COX16Q9P0S2 106 aa20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 MAGED2Q9UNF1 606 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-204ENST00000397760 TGM5O43548 720 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 ADH1AP07327 375 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 RDXP35241 583 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 PBX2P40425 430 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 PPP2R2AP63151 447 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 TAF10Q12962 218 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 NME3Q13232 169 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 LLGL1Q15334 1064 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 ADAM32Q8TC27 787 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 MICAL1Q8TDZ2 1067 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 SLITRK1Q96PX8 696 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 NR2E1Q9Y466 385 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 LRRD1A4D1F6 860 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 C2orf71A6NGG8 1288 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 HIDE1A8MVS5 230 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 GRM6O15303 877 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 SPATA31D3P0C874 917 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 KLRC2P26717 231 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 CETN2P41208 172 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 ERVK-21P61565 698 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 TTC31Q49AM3 519 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 TTC19Q6DKK2 380 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 SPATA31D4Q6ZUB0 917 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 NLRP14Q86W24 1093 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 SLC13A5Q86YT5 568 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 CMASQ8NFW8 434 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 ZNF473Q8WTR7 871 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 PGAP3Q96FM1 320 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 CCT8L2Q96SF2 557 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 TTLL2Q9BWV7 592 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 PABPC3Q9H361 631 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 OSER1Q9NX31 292 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 PATJQ8NI35 1801 aa20.06■□□□□ 0.8
PDLIM2-204ENST00000397760 LPXNO60711 386 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms