RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ANO4Q32M45 955 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 NUGGCQ68CJ6 796 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 TPGS1Q6ZTW0 290 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 MON1BQ7L1V2 547 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 ZNF687Q8N1G0 1237 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 FCRL2Q96LA5 508 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 P2RY13Q9BPV8 354 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 ANP32EQ9BTT0 268 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 METTL5Q9NRN9 209 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 TAS2R14Q9NYV8 317 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 SYNJ2BP-COX16A0A087WUM0 186 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 HOXC11O43248 304 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 CALB1P05937 261 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 NOS2P35228 1153 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 MATKP42679 507 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 HGSNATQ68CP4 663 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 ACAD10Q6JQN1 1059 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 UNC45BQ8IWX7 931 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 DDIT4Q9NX09 232 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.06■■□□□ 1.123e-6■■■□□ 18.3
TSPAN4-206ENST00000397408 COX16Q9P0S2 106 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 WDR35Q9P2L0 1181 aa22.06■■□□□ 1.12
TSPAN4-206ENST00000397408 TMCO5BA8MYB1 307 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 NEDD8-MDP1E9PL57 170 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 DDX3XO00571 662 aaKnown RBP eCLIP22.05■■□□□ 1.121e-6■■■■□ 19.5
TSPAN4-206ENST00000397408 TRDMT1O14717 391 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 NCAM2O15394 837 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 LATS1O95835 1130 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 SERPING1P05155 500 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 TPM1P09493 284 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 CHKAP35790 457 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 FLT3P36888 993 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 OPRD1P41143 372 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 C1QBPQ07021 282 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 TMEM196Q5HYL7 178 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 C12orf40Q86WS4 652 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 CD101Q93033 1021 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 BHMTQ93088 406 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 EXOC4Q96A65 974 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 SLC39A13Q96H72 371 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 BBS2Q9BXC9 721 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 DLGAP2Q9P1A6 1054 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 TMEM59LQ9UK28 342 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 STAP1Q9ULZ2 295 aa22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 BZW2Q9Y6E2 419 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-206ENST00000397408 CHRNB1P11230 501 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 SLC11A2P49281 568 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 GALK1P51570 392 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 GSCP56915 257 aaPredicted RBP22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 GRSF1Q12849 480 aaKnown RBP eCLIP22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 FZD5Q13467 585 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 FSTL4Q6MZW2 842 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 TRNP1Q6NT89 227 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 TMC6Q7Z403 805 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 FAM217AQ8IXS0 508 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 LMAN1LQ9HAT1 526 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 FBRSL1Q9HCM7 1045 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 RBM12Q9NTZ6 932 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 RRN3Q9NYV6 651 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 MARK1Q9P0L2 795 aa22.04■■□□□ 1.12
TSPAN4-206ENST00000397408 M0QYT0 321 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 GJB6O95452 261 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 MOCS2O96007 188 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 APOEP02649 317 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 PLEKP08567 350 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 TYRP14679 529 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 GBP1P32455 592 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 SLC6A11P48066 632 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 SULT1E1P49888 294 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 NME3Q13232 169 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 EIF4EBP2Q13542 120 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 LRRC32Q14392 662 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 ZC3H12AQ5D1E8 599 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 OTUD1Q5VV17 481 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 PPP1R2P3Q6NXS1 205 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 MCOLN2Q8IZK6 566 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 CPXM2Q8N436 756 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 EMC1Q8N766 993 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 NAT16Q8N8M0 369 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 CLDN23Q96B33 292 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 NPY6RQ99463 290 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 STOML2Q9UJZ1 356 aa22.03■■□□□ 1.12
TSPAN4-206ENST00000397408 ACSL4O60488 711 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 MFAP3LO75121 409 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 TFE3P19532 575 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 EIF2DP41214 584 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 CCINQ13939 588 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 DGKKQ5KSL6 1271 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 ADGRF1Q5T601 910 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 ARCQ7LC44 396 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 VPS36Q86VN1 386 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 ETFBKMTQ8IXQ9 262 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 C3orf20Q8ND61 904 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 P2RY11Q96G91 374 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 DNAJC7Q99615 494 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 SELENOOQ9BVL4 669 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 ADAM33Q9BZ11 813 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 PLK2Q9NYY3 685 aa22.02■■□□□ 1.12
TSPAN4-206ENST00000397408 EGFP01133 1207 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms