RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TMC8Q8IU68 726 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 KATNAL2Q8IYT4 538 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 ZNF276Q8N554 614 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 ADAM32Q8TC27 787 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 PBKQ96KB5 322 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 CARD9Q9H257 536 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 IL21Q9HBE4 155 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 WDR6Q9NNW5 1121 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 PIGVQ9NUD9 493 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 CDC23Q9UJX2 597 aa17.63■□□□□ 0.41
TSPAN4-205ENST00000397406 ZNF840PA6NDX5 716 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 F11P03951 625 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 RALAP11233 206 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 GJC1P36383 396 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 NME3Q13232 169 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 TUBB2AQ13885 445 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 SCYL2Q6P3W7 929 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 TMEM150AQ86TG1 271 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 RNF139Q8WU17 664 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 ZNF512Q96ME7 567 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 TUBB2BQ9BVA1 445 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 FAM204AQ9H8W3 233 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 ZWILCHQ9H900 591 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 L2HGDHQ9H9P8 463 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 DZANK1Q9NVP4 752 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 DDIT4Q9NX09 232 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 TRPM5Q9NZQ8 1165 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 NUDT5Q9UKK9 219 aa17.62■□□□□ 0.41
TSPAN4-205ENST00000397406 C2orf16Q68DN1 1984 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 SYNJ2BP-COX16A0A087WUM0 186 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 CCL16O15467 120 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 IRAK2O43187 625 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 PRPSAP2O60256 369 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 RFPL2O75678 378 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 F9P00740 461 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 KRT7P08729 469 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 HNRNPA1P09651 372 aaKnown RBP eCLIP17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 RARAP10276 462 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 PYGMP11217 842 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 PPP3CCP48454 512 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 ZNF211Q13398 564 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 SMTNL2Q2TAL5 461 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 RSRC2Q7L4I2 434 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 FAM131BQ86XD5 332 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 CREG2Q8IUH2 290 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 ELMOD1Q8N336 334 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 TEKT4Q8WW24 435 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 ASIC4Q96FT7 647 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 CCSER2Q9H7U1 834 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 OLA1Q9NTK5 396 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 DDX56Q9NY93 547 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 COX16Q9P0S2 106 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 SFMBT1Q9UHJ3 866 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 DPP7Q9UHL4 492 aa17.61■□□□□ 0.41
TSPAN4-205ENST00000397406 HELZP42694 1942 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 MDM4O15151 490 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 TLR5O60602 858 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 POU2F2P09086 479 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 CXCR3P49682 368 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 BOLA3Q53S33 107 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 KCNT1Q5JUK3 1230 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 AADACL2Q6P093 401 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 TRIM67Q6ZTA4 783 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 GPR149Q86SP6 731 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 HS6ST3Q8IZP7 471 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 RASGEF1CQ8N431 466 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 CCDC185Q8N715 623 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 CMASQ8NFW8 434 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 EXD1Q8NHP7 514 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 ACSF2Q96CM8 615 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 SNRNP25Q9BV90 132 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 KLHL11Q9NVR0 708 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 ZDHHC7Q9NXF8 308 aa17.6■□□□□ 0.41
TSPAN4-205ENST00000397406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.6■□□□□ 0.415e-7■■■■□ 26.4
TSPAN4-205ENST00000397406 MSI1O43347 362 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 PAPLNO95428 1278 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 TBX18O95935 607 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 KRT1P04264 644 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 GBP1P32455 592 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 TUBP50607 506 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 ARSEP51690 589 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 EPHA5P54756 1037 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 C10orf120Q5SQS8 335 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 ERMARDQ5T6L9 678 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 CES5AQ6NT32 575 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 GAREM2Q75VX8 874 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 RAPGEF5Q92565 580 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 ZNF707Q96C28 371 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 MS4A14Q96JA4 679 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 CAPZA3Q96KX2 299 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 SERPINB11Q96P15 392 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 CDK5RAP1Q96SZ6 601 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 FZD10Q9ULW2 581 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 WDFY4Q6ZS81 3184 aa17.59■□□□□ 0.41
TSPAN4-205ENST00000397406 TMEM221A6NGB7 291 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 C3orf70A6NLC5 250 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 I6L893 689 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 M0R296 226 aa17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 PDE2AO00408 941 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-205ENST00000397406 CEP104O60308 925 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms