RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 DEPTORQ8TB45 409 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 PIWIL2Q8TC59 973 aaKnown RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 NCSTNQ92542 709 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 HSPBAP1Q96EW2 488 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 DCUN1D1Q96GG9 259 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 HAPLN2Q9GZV7 340 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 MYOZ2Q9NPC6 264 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TBC1D22BQ9NU19 505 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 THAP1Q9NVV9 213 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ZNFX1Q9P2E3 1918 aaKnown RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 C3orf70A6NLC5 250 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 E7ESA3 106 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ZBED1O96006 694 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 TFAP2AP05549 437 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 NUDT2P50583 147 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 C15orf59Q2T9L4 293 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-203ENST00000396547 MYLK3Q32MK0 819 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 SH2D4BQ5SQS7 431 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 UGT2A3Q6UWM9 527 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 AMIGO2Q86SJ2 522 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 METTL25Q8N6Q8 603 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 ZNF778Q96MU6 729 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 PGLYRP2Q96PD5 576 aa10.16□□□□□ -0.78
TRIM39-203ENST00000396547 CNTNAP1P78357 1384 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 RGS2P41220 211 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 RPL5P46777 297 aaKnown RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 SNRPFP62306 86 aaKnown RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ITGA9Q13797 1035 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 PSMD6Q15008 389 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 NRF1Q16656 503 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 TEX44Q53QW1 395 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 TRIM67Q6ZTA4 783 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ZBTB46Q86UZ6 589 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 C10orf107Q8IVU9 208 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ADGRF2Q8IZF7 708 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 TNS4Q8IZW8 715 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 UBA3Q8TBC4 463 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ZSCAN18Q8TBC5 510 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ST6GALNAC4Q9H4F1 302 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 POLIQ9UNA4 740 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 TMX2Q9Y320 296 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 SMIM31A0A1B0GVY4 71 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 FOXD2O60548 495 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 KLHL2O95198 593 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ENO3P13929 434 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ITGAXP20702 1163 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 SAT1P21673 171 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 GARTP22102 1010 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 SESN2P58004 480 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 HPCAP84074 193 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 MAP3K21Q5TCX8 1036 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 LRRC38Q5VT99 294 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 ANGEL2Q5VTE6 544 aaKnown RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 NXNQ6DKJ4 435 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 AAGABQ6PD74 315 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 UNC5AQ6ZN44 842 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 C15orf39Q6ZRI6 1047 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 TSHZ1Q6ZSZ6 1077 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 FAM156AQ8NDB6 213 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 TRPM4Q8TD43 1214 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 TFB1MQ8WVM0 346 aaKnown RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 MARK4Q96L34 752 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 OXCT2Q9BYC2 517 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 USP29Q9HBJ7 922 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 NGRNQ9NPE2 291 aaKnown RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 SIRPGQ9P1W8 387 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 USP18Q9UMW8 372 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 FAF1Q9UNN5 650 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-203ENST00000396547 PCDHA10Q9Y5I2 948 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 AP4B1Q9Y6B7 739 aa10.15□□□□□ -0.78
TRIM39-203ENST00000396547 A0A0J9YVX5 310 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 NDC80O14777 642 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 ADORA2AP29274 412 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 IDH3AP50213 366 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 SLC25A11Q02978 314 aaKnown RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 PPIDQ08752 370 aaKnown RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 CYLC2Q14093 348 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 PPP2R5DQ14738 602 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 KYAT3Q6YP21 454 aaKnown RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 TRIML2Q8N7C3 387 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 SYTL5Q8TDW5 730 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 CDRT15Q96T59 188 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 CEP41Q9BYV8 373 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 SEMA6AQ9H2E6 1030 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 FETUBQ9UGM5 382 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 APOC4-APOC2K7ER74 178 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 ZSCAN9O15535 394 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 CRTAMO95727 393 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 APOEP02649 317 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 APOC2P02655 101 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 TBXAS1P24557 533 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 HDAC4P56524 1084 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 WASHC5Q12768 1159 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 HNRNPDQ14103 355 aaKnown RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 PPM1LQ5SGD2 360 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 LRRC8BQ6P9F7 803 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 THNSL1Q8IYQ7 743 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms