RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ZNF653Q96CK0 615 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 PANX2Q96RD6 677 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 NPY6RQ99463 290 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 ECT2Q9H8V3 914 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 ARHGEF3Q9NR81 526 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 DDIT4Q9NX09 232 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 COX16Q9P0S2 106 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 AGO1Q9UL18 857 aaKnown RBP19.99■□□□□ 0.79
HOXA9-202ENST00000396345 COL4A2P08572 1712 aa19.99■□□□□ 0.79
HOXA9-202ENST00000396345 TCRBV5S1A1TA0A578 114 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 ANKRD62A6NC57 917 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 M0QYT0 321 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 MYBL1P10243 752 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 PDGFRAP16234 1089 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 NR1H3Q13133 447 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 SLC25A52Q3SY17 297 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 TRNP1Q6NT89 227 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 RXFP2Q8WXD0 754 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 NT5C3BQ969T7 300 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 SLC39A13Q96H72 371 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 FCRL2Q96LA5 508 aaPredicted RBP19.98■□□□□ 0.79
HOXA9-202ENST00000396345 C8orf33Q9H7E9 229 aaPredicted RBP19.98■□□□□ 0.79
HOXA9-202ENST00000396345 PARVAQ9NVD7 372 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 CNOT8Q9UFF9 292 aaKnown RBP19.98■□□□□ 0.79
HOXA9-202ENST00000396345 PIAS3Q9Y6X2 628 aa19.98■□□□□ 0.79
HOXA9-202ENST00000396345 KRBA1A5PL33 1030 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 TMEM221A6NGB7 291 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 OTOL1A6NHN0 477 aaPredicted RBP19.97■□□□□ 0.79
HOXA9-202ENST00000396345 C2CD4BA6NLJ0 364 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 GOLGA6L6A8MZA4 724 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 M0R296 226 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 ATMINO43313 823 aaPredicted RBP19.97■□□□□ 0.79
HOXA9-202ENST00000396345 CYP17A1P05093 508 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 GLULP15104 373 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 COL9A1P20849 921 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 RFC1P35251 1148 aaPredicted RBP19.97■□□□□ 0.79
HOXA9-202ENST00000396345 MLLT6P55198 1093 aaPredicted RBP19.97■□□□□ 0.79
HOXA9-202ENST00000396345 PRKCQQ04759 706 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 NME3Q13232 169 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 MAMLD1Q13495 774 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 EIF4EBP2Q13542 120 aaPredicted RBP19.97■□□□□ 0.79
HOXA9-202ENST00000396345 DHCR24Q15392 516 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 ZC3H12AQ5D1E8 599 aaKnown RBP19.97■□□□□ 0.79
HOXA9-202ENST00000396345 PPP1R15BQ5SWA1 713 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 PLEKHA7Q6IQ23 1121 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 DCUN1D2Q6PH85 259 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 RNF34Q969K3 372 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 SHDQ96IW2 340 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 CFAP57Q96MR6 1250 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 TBCBQ99426 244 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 MYO1AQ9UBC5 1043 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 NENFQ9UMX5 172 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 TECTAO75443 2155 aa19.97■□□□□ 0.79
HOXA9-202ENST00000396345 LATS1O95835 1130 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 ADH1CP00326 375 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 F9P00740 461 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 APOEP02649 317 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 SLC2A3P11169 496 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 TFE3P19532 575 aaPredicted RBP19.96■□□□□ 0.79
HOXA9-202ENST00000396345 ABCB4P21439 1286 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 GPD1P21695 349 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 SDC4P31431 198 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 SOX9P48436 509 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 DEUP1Q05D60 604 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 LY6G5CQ5SRR4 150 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 OTUD1Q5VV17 481 aaPredicted RBP19.96■□□□□ 0.79
HOXA9-202ENST00000396345 RHBDF2Q6PJF5 856 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 TPRG1Q6ZUI0 275 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 SND1Q7KZF4 910 aaKnown RBP eCLIP19.96■□□□□ 0.79
HOXA9-202ENST00000396345 AZIN2Q96A70 460 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 PGAP3Q96FM1 320 aaPredicted RBP19.96■□□□□ 0.79
HOXA9-202ENST00000396345 MCEEQ96PE7 176 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 C1QTNF1Q9BXJ1 281 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 ADAM33Q9BZ11 813 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 SPHK2Q9NRA0 654 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 TMEM51Q9NW97 253 aa19.96■□□□□ 0.79
HOXA9-202ENST00000396345 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.96■□□□□ 0.79
HOXA9-202ENST00000396345 SPECC1L-ADORA2AF8WAN1 911 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 ACSL4O60488 711 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 MOCS2O96007 188 aaPredicted RBP19.95■□□□□ 0.78
HOXA9-202ENST00000396345 CCR1P32246 355 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 GJA4P35212 333 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 CHKAP35790 457 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 PTPN9P43378 593 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 SLC11A2P49281 568 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 GALCP54803 685 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 RPL7AP62424 266 aaKnown RBP19.95■□□□□ 0.78
HOXA9-202ENST00000396345 ATP11AP98196 1134 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 AMPD2Q01433 879 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 CCDC14Q49A88 953 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 RALGPS2Q86X27 583 aaPredicted RBP19.95■□□□□ 0.78
HOXA9-202ENST00000396345 MSANTD3Q96H12 275 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 THAP2Q9H0W7 228 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 PIGVQ9NUD9 493 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 SPTLC3Q9NUV7 552 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 CALCOCO1Q9P1Z2 691 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 SLC12A6Q9UHW9 1150 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 SCINQ9Y6U3 715 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 MYOFQ9NZM1 2061 aa19.95■□□□□ 0.78
HOXA9-202ENST00000396345 MAN2B1O00754 1011 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms