RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 PPP1R21Q6ZMI0 780 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 THEM5Q8N1Q8 247 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 CCDC110Q8TBZ0 833 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 ATXN2LQ8WWM7 1075 aaKnown RBP12.58□□□□□ -0.4
ITGB1-202ENST00000396033 QKIQ96PU8 341 aaKnown RBP eCLIP12.58□□□□□ -0.4
ITGB1-202ENST00000396033 TMEM209Q96SK2 561 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
ITGB1-202ENST00000396033 ARHGEF4Q9NR80 690 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 CLUHO75153 1309 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 ARHGEF37A1IGU5 675 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 GPX6P59796 221 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 TSPY1Q01534 308 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 LHX8Q68G74 356 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 KCNT2Q6UVM3 1135 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 SLC24A5Q71RS6 500 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 SUSD3Q96L08 255 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 WDR83Q9BRX9 315 aaKnown RBP12.57□□□□□ -0.4
ITGB1-202ENST00000396033 CSNK1G1Q9HCP0 422 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 DMAP1Q9NPF5 467 aaPredicted RBP12.57□□□□□ -0.4
ITGB1-202ENST00000396033 TMLHEQ9NVH6 421 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 DTLQ9NZJ0 730 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 C9IYK1 514 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 CREB1P16220 341 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 RTN4RL1Q86UN2 441 aaPredicted RBP12.57□□□□□ -0.4
ITGB1-202ENST00000396033 SRRM1Q8IYB3 904 aaKnown RBP12.57□□□□□ -0.4
ITGB1-202ENST00000396033 MRRFQ96E11 262 aaKnown RBP12.57□□□□□ -0.4
ITGB1-202ENST00000396033 KCNK9Q9NPC2 374 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 EURLQ9NYK6 297 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 TMEM120BA0PK00 339 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 INPPL1O15357 1258 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 MFSD11O43934 449 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 GCAP28676 217 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 SSTR1P30872 391 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
ITGB1-202ENST00000396033 PALM2Q8IXS6 379 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 URGCPQ8TCY9 931 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 MGARPQ8TDB4 240 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 LINC01599Q8WXQ3 324 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 DDIT4Q9NX09 232 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 CHMP2BQ9UQN3 213 aa12.57□□□□□ -0.4
ITGB1-202ENST00000396033 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 EOMESO95936 686 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 GNRH1P01148 92 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 BRAFP15056 766 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 CNPY4Q8N129 248 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 SLAIN1Q8ND83 568 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 EDEM1Q92611 657 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 CD248Q9HCU0 757 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 RASA4BC9J798 803 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 EEF2KO00418 725 aaKnown RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 RASA4O43374 803 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 B4GALT3O60512 393 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 MAPRE1Q15691 268 aaKnown RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 CLLU1OSQ5K130 101 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 LRRTM3Q86VH5 581 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 ZNF280BQ86YH2 543 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 TDRPQ86YL5 185 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 ANKRD42Q8N9B4 389 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 SLC43A3Q8NBI5 491 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 TFB1MQ8WVM0 346 aaKnown RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 PKMYT1Q99640 499 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 PRMT1Q99873 361 aaKnown RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 SUFUQ9UMX1 484 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 TYMPP19971 482 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 IFNAR2P48551 515 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 YWHAHQ04917 246 aaPredicted RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 NOMO2Q5JPE7 1267 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 BZW1Q7L1Q6 419 aaKnown RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 BHLHA9Q7RTU4 235 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 VPS52Q8N1B4 723 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 DYDC1Q8WWB3 177 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 OLFM3Q96PB7 478 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 ETNK1Q9HBU6 452 aa12.56□□□□□ -0.4
ITGB1-202ENST00000396033 WDR6Q9NNW5 1121 aaKnown RBP12.56□□□□□ -0.4
ITGB1-202ENST00000396033 DDHD2O94830 711 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 APRTP07741 180 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 ATP2A2P16615 1042 aaKnown RBP12.55□□□□□ -0.4
ITGB1-202ENST00000396033 ELK3P41970 407 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 C4orf22Q6V702 233 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 RFX8Q6ZV50 586 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 NTAN1Q96AB6 310 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 CHMP6Q96FZ7 201 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 PPCSQ9HAB8 311 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 PRDM16Q9HAZ2 1276 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 RRN3Q9NYV6 651 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.43e-6■■□□□ 13.8
ITGB1-202ENST00000396033 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 HACD1B0YJ81 288 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 ARVCFO00192 962 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 ADRA1BP35368 520 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 AIF1P55008 147 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 EFTUD2Q15029 972 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■■ 41.1
ITGB1-202ENST00000396033 LRRC14Q15048 493 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 ARHGEF18Q6ZSZ5 1173 aa12.55□□□□□ -0.4
ITGB1-202ENST00000396033 SPATA2LQ8IUW3 424 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms